Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10014315m |
Family | GH3 |
Protein Properties | Length: 803 Molecular Weight: 88253.8 Isoelectric Point: 6.1241 |
Chromosome | Chromosome/Scaffold: 2 Start: 34957319 End: 34960394 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 91 | 353 | 0 |
GVPRLGLPLYEWWSEALHGVSFIGRRTNSPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMYNLGNAGLTFWSPNINVVRDPRWGRV LETPGEDPYVVGRYAINYVRGLQDVEGVEYHRDSDSRPLKISACCKHYAAYDLDNWEGNDRFHFDSRVTEQDMQETFILPFEMCVNEGDVSSVMCSYNRV NGIPTCADPKLLNQTIRGDWNFHGYIVSDCDSIQTIVESHKFLNDTKEDAVARVLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 803 Download |
MSKVVTVSFL IIICITCIEI GSDAQPQPIT GIKKTPFTYI CDPARFESIK VKLSDFPYCD 60 AKLPYPERAK DLVERMTLPE KVQQMGDLAY GVPRLGLPLY EWWSEALHGV SFIGRRTNSP 120 PGTHFDSEVP GATSFPTVIL TTASFNESLW KKIGQTVSTE ARAMYNLGNA GLTFWSPNIN 180 VVRDPRWGRV LETPGEDPYV VGRYAINYVR GLQDVEGVEY HRDSDSRPLK ISACCKHYAA 240 YDLDNWEGND RFHFDSRVTE QDMQETFILP FEMCVNEGDV SSVMCSYNRV NGIPTCADPK 300 LLNQTIRGDW NFHGYIVSDC DSIQTIVESH KFLNDTKEDA VARVLKAGLD LDCGDYYTNF 360 TMGAVQQGKI AEADIDTSLR FLYIVLMRLG YFDGSPQYKN LGKNNICNPQ HIELAAEAAR 420 QGIVLLKNDN GALPLNTGNI KTLALVGPHA NATKAMIGNY EGTPCRYTSP MDGFYAYSKV 480 INYAPGCADI VCQNNSMIPA AIDAAKNADA TVIVAGLDLS VEAEGKDRVD LLLPGFQTEL 540 INKVADAAKG PVTLVIMSAG AVDINFAKNN PKIKSILWVG YPGEEGGRAI ADVIFGKYNP 600 GGRLPITWYE ANYVKIPYTS MPLRPVNNFP GRTYKFFDGP VVYPFGYGLS YTQFKYKVAS 660 SPKSVDIKLD KDQQCRDINY TVGTNKPPCA AVLIDDVKCK DYKFTFQIEV ENMGKMDGSE 720 VVMVYSKPPG IAGTHIKQVI GYERVFIAAG QSAKVAFTMN ACKSLKIVDN AANSLLASGA 780 HTILVGEGVG GVSFPLQLNL NH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-55 | 423 | 652 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-57 | 79 | 451 | 381 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-61 | 91 | 380 | 293 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 4.0e-71 | 71 | 760 | 781 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 54 | 787 | 752 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 37 | 802 | 45 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 37 | 802 | 46 | 805 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 21 | 799 | 33 | 806 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 71 | 800 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 33 | 799 | 43 | 800 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 133 | 759 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u48_A | 0 | 133 | 759 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_B | 0 | 133 | 759 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_A | 0 | 133 | 759 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2x41_A | 8.40779e-45 | 67 | 729 | 2 | 642 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |