Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10014325m |
Family | GH3 |
Protein Properties | Length: 794 Molecular Weight: 87103.9 Isoelectric Point: 5.9481 |
Chromosome | Chromosome/Scaffold: 2 Start: 29826465 End: 29829544 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 88 | 344 | 0 |
GVPRLGLPQYEWWSEALHGVSNVGPGTHFDDVVPGATSFPTVILTTASFNESLWKKIGRAVSTEARAMYNLGRGGLTYWSPNINVARDPRWGRITETPGE DPFVVGRYAVNYVRGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSC ADPKLLNQTVRGEWDLHGYIVADCDSIQVMVDNHKFLSDSKEDAVAQTLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 794 Download |
MAKVVSSLLC LISLSIALLV FSTNAVDANG SSSPVFVCDP GRFSKLGLQM SSFLFCDSSL 60 PYSIRVKDLV SRMTLDEKVQ QLGDFAHGVP RLGLPQYEWW SEALHGVSNV GPGTHFDDVV 120 PGATSFPTVI LTTASFNESL WKKIGRAVST EARAMYNLGR GGLTYWSPNI NVARDPRWGR 180 ITETPGEDPF VVGRYAVNYV RGLQDVEGHE NATDLNSRPL KVSSCCKHYA AYDVDNWKGV 240 DRYHFDARVT EQDMEETFLR PFEMCVKEGD ASSVMCSYNR VNGIPSCADP KLLNQTVRGE 300 WDLHGYIVAD CDSIQVMVDN HKFLSDSKED AVAQTLKAGL DLDCGQYYTN FTGNAVQQGK 360 VKETDIDKSL KYLYTVLMRL GFFDGSPQYV SLGKQDICSD ENIELAAEAA REGIVLLKND 420 QNTLPLNSAK VKTVAVVGPH ANATVAMIGN YAGIPCRYMS PIAGFSGYAN VTYKTGCDDV 480 ACKSNNSIFA ASEAAKTTDA TIILAGLDLS VEAESLDRED LWLPGYQTQL INQVAEVAKG 540 PVILVIMSAG GVDIAFAETN TNIKAILWAG YPGEEGGRAI ADVVFGKFNP GGRLPITWYN 600 GDYVQMLPLT SMPLRPIDSL GYPGRTYKFY NGPTLYPFGY GLSYTQFKYN LLSFTKTIHV 660 NLNKLQHCRN LNYTSDASKT RCPGVLVNDL RCDDYFEFKV DVQNVGSTDG SDVVIVYSKP 720 PAEIAATYIK QVIGFQRVFV RAGRNKRIKF VFNACKSLNI VDYAANTLLP AGEHTIFIGN 780 GGVSFPIHLN FNY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-56 | 77 | 442 | 374 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 7.0e-59 | 414 | 645 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 8.0e-63 | 74 | 376 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-74 | 66 | 750 | 757 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 20 | 780 | 778 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 8 | 793 | 9 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 792 | 1 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 36 | 791 | 51 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 68 | 791 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 22 | 792 | 34 | 802 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 66 | 779 | 7 | 722 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u48_A | 0 | 66 | 779 | 7 | 722 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u4a_B | 0 | 66 | 779 | 7 | 722 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3u4a_A | 0 | 66 | 779 | 7 | 722 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 2x41_A | 6.99949e-42 | 65 | 655 | 3 | 611 | A Chain A, The Structure Of Soybean Peroxidase |