Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10014537m |
Family | GH3 |
Protein Properties | Length: 660 Molecular Weight: 71631.2 Isoelectric Point: 6.3298 |
Chromosome | Chromosome/Scaffold: 2 Start: 691427 End: 698055 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 107 | 340 | 0 |
ASRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRDPELVKRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQG DPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKGFV ISDWQGIDRITSPPHSNYTYSVQAGIQAGIDMVM |
Full Sequence |
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Protein Sequence Length: 660 Download |
MKTVRILMRA VLLGMVSLLS FANAEYAKYK DPKQPVAVRV KDLLGRMSLE EKIGQMVQID 60 RTIATVQFLK DYSIGSVLSG GGSTPLPQAS AADWINMIND FQRGSLASRL GIPMIYGIDA 120 VHGHNNVYNA TIFPHNVGLG ATRDPELVKR IGAATALEVR ATGIPYVFAP CIAVCRDPRW 180 GRCYESYSED HKIVQEMTDV ILGLQGDPPS NLRKGVPYVG GKDKVAACAK HFVGDGGTTN 240 GINENNTVID MHGLLSIHMP AYSDSIIKGV STIMVSYSSW NGEKMHANRE LVTGFLKGTL 300 KFKGFVISDW QGIDRITSPP HSNYTYSVQA GIQAGIDMVM IPFNLTEFID DLTDLVKNNV 360 ITMDRIDDAV GRILLVKFSM GLFENPLADL SLVNELGSQA HRDLAREAVR KSLVLLKNGK 420 NESHPLIPLP KKAPKILVAG SHADNLGYQC GGWTINWQGF SGNNYTRGTT ILGAIRSAVD 480 SSTEVVYRDN PDSDFVKSNN FDYAIVAVGE APYAESAGDS MTLTMLDPDP SVITNVCEAV 540 KCVVIIISGR PIVIEPYISS VDALVAAWLP GTEGQGVTDV LFGDYGFSGK LPRSWFKTVD 600 QLPMNVGDPH YDPLFPFDFG LKTESVPSIV ARSTSAGVDG KPFVFLVMIS LIFALYFTG* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-26 | 109 | 605 | 550 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-45 | 413 | 621 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-73 | 1 | 621 | 708 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-75 | 47 | 456 | 417 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-80 | 48 | 374 | 331 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24995.1 | 0 | 47 | 657 | 1 | 614 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_680141.2 | 0 | 3 | 656 | 5 | 657 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 25 | 657 | 24 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 1 | 626 | 1 | 625 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 7 | 649 | 1 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 25 | 625 | 1 | 601 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 1x38_A | 0 | 25 | 625 | 1 | 601 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 1lq2_A | 0 | 25 | 625 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 25 | 625 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 25 | 625 | 1 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |