| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10014564m |
| Family | GT31 |
| Protein Properties | Length: 647 Molecular Weight: 73875.6 Isoelectric Point: 8.0335 |
| Chromosome | Chromosome/Scaffold: 2 Start: 31772845 End: 31778082 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 414 | 597 | 0 |
| ERMAIRKTWMQSSKIRSSNVVARFFVALNPRKEVNAVLKKEAAFFGDIVILPFMDRYELVVLKTIAICEFGVQNVTAAYIMKCDDDTFIRVDAVLKEIEG IFPMRSLYMGNLNLLHRPLRTGKWAVTYEEWPQEVYPPYANGPGYVISSDIAKFIVLQHGNQSLRLFKMEDVSMGMWVEQFNST | |||
| Full Sequence |
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| Protein Sequence Length: 647 Download |
| MHFEIASVLS GDDNYIGLDE KLVGYNGDSD LSKPFFSSVY KDTFHRKLED NENQEAPLMP 60 REVLLKNGNG GSRPIKPLQF RYGRITGEIM RRRNRTSEFS VLERMADEAW TLGLKAWDEV 120 DKFDVKETVS SNVYEGKPES CPSWLSMSGE ELANGDRLMF LPCGLAAGSS ITVVGTPHYA 180 HQEFLPQLTR RRNGDSLVMV SQFMVELQGL KSVDGEDPPK ILHLNPRIKG DWSHRPVIEH 240 NTCYRMQWGT AQRCDGLSSK KDDDMLVDGN LRCEKWMRND VVDSKDSKTA SWFKRFIGRE 300 QKPEVTWPFP FVEGRLFILT LRAGVEGYHI NVGGRHVTSF PYRTGFTLED ATGLAIKGDV 360 DIHSVYATNL PASHPSFSLQ RVLEMSSKWK AEPLPARPVH LFIGVLSATN HFAERMAIRK 420 TWMQSSKIRS SNVVARFFVA LNPRKEVNAV LKKEAAFFGD IVILPFMDRY ELVVLKTIAI 480 CEFGVQNVTA AYIMKCDDDT FIRVDAVLKE IEGIFPMRSL YMGNLNLLHR PLRTGKWAVT 540 YEEWPQEVYP PYANGPGYVI SSDIAKFIVL QHGNQSLRLF KMEDVSMGMW VEQFNSTMTV 600 RYSHSWKFCQ YGCMEGYYTA HYQSPRQMIC LWDKLSRGRA HCCNFR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 2.0e-18 | 162 | 365 | 204 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 7.0e-21 | 160 | 365 | 206 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 3.0e-24 | 161 | 365 | 205 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 2.0e-27 | 413 | 592 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 4.0e-129 | 104 | 643 | 552 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN60867.1 | 0 | 12 | 646 | 32 | 674 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272405.1 | 0 | 12 | 646 | 32 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308783.1 | 0 | 102 | 646 | 1 | 545 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322528.1 | 0 | 105 | 646 | 1 | 542 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531052.1 | 0 | 2 | 646 | 37 | 683 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO783382 | 348 | 98 | 445 | 0 |
| GO862085 | 341 | 234 | 573 | 0 |
| CV530690 | 287 | 233 | 519 | 0 |
| GT043202 | 286 | 362 | 647 | 0 |
| EE066944 | 254 | 308 | 561 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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