| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10014583m |
| Family | GH9 |
| Protein Properties | Length: 638 Molecular Weight: 70781.9 Isoelectric Point: 9.5576 |
| Chromosome | Chromosome/Scaffold: 2 Start: 29414142 End: 29418691 |
| Description | Six-hairpin glycosidases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 128 | 602 | 0 |
| DYTHALHKALLFFNAQKSGKLPKNNGIPWRGNSGLSDGNSTTDVKGGLVGGYYDAGDNTKFHFPMSFAMTMLSWSLIEYNHKYQSIGEYDHMRDLIKWGT DYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGGKR RPYCRGNPFIEPYYNSSGYFDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYRIPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDMLRMYHNT TSLTMCSYLEQFHVFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLRSFSTSQIDYILGKNPTKMSYVVGYGKKFP RHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDRFDKFHDVRTNHNYTEPTLAGNAGLVAALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 638 Download |
| MHGGNHWGGS LEIVNSNSIA EGFADSNHNR SNNNNNNHSS SSTDDWDRAA LHSQRFHHLD 60 ETQQSWLLGP KETNKKNRYV DLGCIVVSHK ALKWTVASFL IAFLVIGLPV IIAKSLPKHK 120 SAPPSPDDYT HALHKALLFF NAQKSGKLPK NNGIPWRGNS GLSDGNSTTD VKGGLVGGYY 180 DAGDNTKFHF PMSFAMTMLS WSLIEYNHKY QSIGEYDHMR DLIKWGTDYL LLTFNSSATK 240 IDKIYAQVGG SQNGTSEPND HNCWQRPEDM DYPRPVQTIN AGPDLAGEMA AALAAASIVF 300 KDNTAYSRKL VKGAKTVFDF AREGGKRRPY CRGNPFIEPY YNSSGYFDEY MWGAAWLYYA 360 TGNVSYLSLA TNSGLPKNSK AFYRIPEKSV LSWDNKLPAA MLLLTRFRIF LSPGYPYEDM 420 LRMYHNTTSL TMCSYLEQFH VFNWTRGGMV QLNQGKPQPL QYVANAAFLA SLYVDYLNAS 480 GAPGFTCGPN FITLAKLRSF STSQIDYILG KNPTKMSYVV GYGKKFPRHV HHRGASIPSD 540 GKKYSCKGGW KWSNNPKPNP HNITGAMVAG PDRFDKFHDV RTNHNYTEPT LAGNAGLVAA 600 LASLTTSAGI GIDKNTMFSA IPPLYPQSPP PPPQWKP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02909 | PLN02909 | 2.0e-111 | 96 | 589 | 504 | + Endoglucanase | ||
| PLN02613 | PLN02613 | 2.0e-114 | 127 | 590 | 478 | + endoglucanase | ||
| PLN02266 | PLN02266 | 2.0e-115 | 96 | 589 | 509 | + endoglucanase | ||
| PLN02345 | PLN02345 | 1.0e-140 | 132 | 590 | 467 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 6.0e-155 | 128 | 590 | 469 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54547.1 | 0 | 1 | 621 | 1 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| RefSeq | XP_002266444.1 | 0 | 1 | 621 | 1 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312211.1 | 0 | 1 | 637 | 1 | 620 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002315101.1 | 0 | 1 | 621 | 1 | 605 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514768.1 | 0 | 1 | 621 | 1 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 128 | 605 | 4 | 429 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1ksc_A | 0 | 128 | 605 | 4 | 429 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1ks8_A | 0 | 128 | 605 | 4 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 128 | 604 | 25 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 128 | 609 | 5 | 445 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
