| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10014607m |
| Family | GH47 |
| Protein Properties | Length: 626 Molecular Weight: 70521.5 Isoelectric Point: 6.8409 |
| Chromosome | Chromosome/Scaffold: 2 Start: 35126756 End: 35130519 |
| Description | alpha-mannosidase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 137 | 621 | 0 |
| AFIHAWSGYKKYAMGYDELQPLSKIGTDGLGGLGATVVDALDTAMIMSADDIVSEAGSWIETHLLDRISQKGQVNLFETTIRVLGGLLSAYHLSGGEQEM NPTAKGPRPIVYLDIAKKLADRLLIAFTSSPTSIPFSDVVLRDSTAHPAPDGLSSTSEVSTLQLEFNYLSTVSGDPKYSMEAMKVLEHLKTLPKVEGLVP IYISPHSGEFNGENIRLGSRGDSYYEYLIKVWLQQGISHNSNLTYLHDMYEEAMKGVRHLLVRKSIPNGLVFVGELPYGSTGSYSPKMDHLVCFLPGTLA LGATKGITKEKAMKDNLLTFEDLENLKLAEDLAKTCFEMYSVTSTGLSPEIAYFHTQEYYEGSLDGGNKSSEYLNDIIIKHADRHNLLRPETVESLFVLY RITEDPMYREWGWQIFEAFEKYTKVDSGGYTSLDDVTMLPPRRRDKMETFFLGETLKYLYLLFDDSSVIPLDQFVFNSEAHPFPI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 626 Download |
| MSKNLPYSMK DVHYDNAKFR PRSFFKVITQ SLFTSNIKRD CTSCSTGKFL LLLLIFGLMY 60 AMLTHKSPIQ SGIRTTEEYK SVNTSSRFGR FWRRKPPRLP PRLTPDEKVG NNSFNRGPKL 120 TNVGSKWMDR QRDVKEAFIH AWSGYKKYAM GYDELQPLSK IGTDGLGGLG ATVVDALDTA 180 MIMSADDIVS EAGSWIETHL LDRISQKGQV NLFETTIRVL GGLLSAYHLS GGEQEMNPTA 240 KGPRPIVYLD IAKKLADRLL IAFTSSPTSI PFSDVVLRDS TAHPAPDGLS STSEVSTLQL 300 EFNYLSTVSG DPKYSMEAMK VLEHLKTLPK VEGLVPIYIS PHSGEFNGEN IRLGSRGDSY 360 YEYLIKVWLQ QGISHNSNLT YLHDMYEEAM KGVRHLLVRK SIPNGLVFVG ELPYGSTGSY 420 SPKMDHLVCF LPGTLALGAT KGITKEKAMK DNLLTFEDLE NLKLAEDLAK TCFEMYSVTS 480 TGLSPEIAYF HTQEYYEGSL DGGNKSSEYL NDIIIKHADR HNLLRPETVE SLFVLYRITE 540 DPMYREWGWQ IFEAFEKYTK VDSGGYTSLD DVTMLPPRRR DKMETFFLGE TLKYLYLLFD 600 DSSVIPLDQF VFNSEAHPFP IRGTI* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PTZ00470 | PTZ00470 | 2.0e-167 | 130 | 621 | 495 | + glycoside hydrolase family 47 protein; Provisional |
| pfam01532 | Glyco_hydro_47 | 0 | 137 | 621 | 489 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG52061.1 | 0 | 106 | 622 | 41 | 558 | AC022455_15 endoplasmic reticulum alpha-mannosidase, putative; 33510-31408 [Arabidopsis thaliana] |
| RefSeq | NP_564345.1 | 0 | 1 | 622 | 1 | 621 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275664.1 | 0 | 1 | 623 | 1 | 634 | PREDICTED: similar to glycoside hydrolase family 47 protein [Vitis vinifera] |
| RefSeq | XP_002306001.1 | 0 | 1 | 624 | 1 | 631 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519694.1 | 0 | 1 | 624 | 1 | 622 | endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fmi_A | 0 | 130 | 621 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 130 | 621 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 130 | 621 | 10 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 130 | 621 | 88 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1g6i_A | 0 | 124 | 621 | 34 | 528 | A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With Bound 1- Deoxymannojirimycin At 1.59 A Resolution |
