| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10014825m |
| Family | AA1 |
| Protein Properties | Length: 544 Molecular Weight: 61433.8 Isoelectric Point: 9.9498 |
| Chromosome | Chromosome/Scaffold: 2 Start: 35442262 End: 35446108 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 46 | 498 | 0 |
| KQQGILINGQFPGPQIDAVTNDNLIISVYNYLREPFLISWNGLQQRRNSWQDGVYGTTCPIPPGKNFTYVLQAKDQIGSYFYFPSFLFHKAAGAFGGIRI WSRPRIPVPFPPPAGDFTVLAGDWYRSNHYVLRRLLDSGHNLPFPDGLLINGRGWNGYTFTVEPGRTYRFRISNVGLTTSINFRIQGHSMKLVEVEGSHT LQNTYAALDIHLGQTYSVLVTMDQAPQDYYIVVSSRFTPRVLTTTAILHYSNSRRGVSGPIPGGPTTEIAWSLNQARSIRWNLTASGPRPNPQGSYHYGM IKISRTITLANSAPYMNGKQRYAINGVSFVPADTPLKLADYFKIPGVFTLGSMPTSPNWGNAYLQTSVMASNFREFVEIVFQNWEDTVQSYHIDGYSFFV VGMDGGQWTPASRTRYNLRDTVARSTTQVYPRSWTAIYMALDNVGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 544 Download |
| MRDSRVLCSL IALLLSLAVN GVYGDSPYRF FTWKITYGDI YPLGVKQQGI LINGQFPGPQ 60 IDAVTNDNLI ISVYNYLREP FLISWNGLQQ RRNSWQDGVY GTTCPIPPGK NFTYVLQAKD 120 QIGSYFYFPS FLFHKAAGAF GGIRIWSRPR IPVPFPPPAG DFTVLAGDWY RSNHYVLRRL 180 LDSGHNLPFP DGLLINGRGW NGYTFTVEPG RTYRFRISNV GLTTSINFRI QGHSMKLVEV 240 EGSHTLQNTY AALDIHLGQT YSVLVTMDQA PQDYYIVVSS RFTPRVLTTT AILHYSNSRR 300 GVSGPIPGGP TTEIAWSLNQ ARSIRWNLTA SGPRPNPQGS YHYGMIKISR TITLANSAPY 360 MNGKQRYAIN GVSFVPADTP LKLADYFKIP GVFTLGSMPT SPNWGNAYLQ TSVMASNFRE 420 FVEIVFQNWE DTVQSYHIDG YSFFVVGMDG GQWTPASRTR YNLRDTVARS TTQVYPRSWT 480 AIYMALDNVG MWNIRSENWA RQYLGQQFYL RVYSPANSWR DELPIPKNAL LCGRARGRHT 540 RPL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 22 | 540 | 519 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 22 | 540 | 519 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 22 | 540 | 522 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 21 | 537 | 526 | + copper ion binding / oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 23 | 536 | 525 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 1 | 543 | 1 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 1 | 543 | 1 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 1 | 543 | 1 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 1 | 543 | 1 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 19 | 543 | 17 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 26 | 533 | 1 | 539 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asq_A | 0 | 26 | 533 | 1 | 539 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asp_B | 0 | 26 | 533 | 1 | 539 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1asp_A | 0 | 26 | 533 | 1 | 539 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1aso_B | 0 | 26 | 533 | 1 | 539 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
