| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10014874m |
| Family | CBM57 |
| Protein Properties | Length: 532 Molecular Weight: 58864.6 Isoelectric Point: 6.8252 |
| Chromosome | Chromosome/Scaffold: 2 Start: 33640676 End: 33645349 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 210 | 359 | 2.3e-26 |
| DYSGDHWGGDRFWNPILSFGQNADQRRSTESSIKQASKAPNFYPEALYQTTLVSTDSQPDLQYTMDVDPNRNYSIWLHFAEIDNTITGVGQRVFDILING NIAFEGVDVVKMSGDHYTALVLNTTVAVNGRTLTVTLHPKGGSHAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 532 Download |
| MLRFHFLWLL VFCSALNSSS ARHAPFAMRI SCGARQNIHS PPTNTLWFKD FAYTGGIPAN 60 ATRPSFITPP LKTLRYFPLS EGPENCYIIN RVPKGHYNVR IFFGLVTLTS FDHEPLFDIS 120 VEGTQIYSLK SGWSDHDDQA FAEALVFLRD GTVSICFHST GHGDPAILSL EILQVDDKAY 180 YFGQGWGEGL ILRTATRLSC GNGKPKFDVD YSGDHWGGDR FWNPILSFGQ NADQRRSTES 240 SIKQASKAPN FYPEALYQTT LVSTDSQPDL QYTMDVDPNR NYSIWLHFAE IDNTITGVGQ 300 RVFDILINGN IAFEGVDVVK MSGDHYTALV LNTTVAVNGR TLTVTLHPKG GSHAIINAIE 360 VFEIIAVESK TLPEEVRALQ VLKNSLDLPH RFGWNGDPCV PQQHPWSGAD CQFDRTSHKW 420 VIDGLGLDNQ GLRGFLPNGI SKLRHLQSIN LSGNSIHGAI PSSLGTIASL EVLDLSYNFF 480 NGSIPESLGQ LTALRRLNLN GNSLSGRVPA ALGGRLLHRA SFKYVWAMDY L* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 8.0e-9 | 425 | 513 | 89 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 9.0e-16 | 197 | 359 | 166 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 1.0e-68 | 30 | 364 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 7 | 524 | 520 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 23 | 525 | 22 | 525 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 1 | 525 | 2 | 526 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 28 | 525 | 1 | 501 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 28 | 525 | 1 | 498 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 1 | 525 | 1 | 531 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.0000000008 | 421 | 512 | 467 | 558 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3rgz_A | 0.000000001 | 397 | 509 | 611 | 721 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3rgz_A | 0.000000007 | 369 | 512 | 356 | 486 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3rgz_A | 0.000001 | 432 | 513 | 454 | 535 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3rgz_A | 0.000004 | 449 | 512 | 637 | 700 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
