CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10014882m
FamilyGT92
Protein PropertiesLength: 530 Molecular Weight: 60513 Isoelectric Point: 9.1251
ChromosomeChromosome/Scaffold: 2 Start: 29616640 End: 29620120
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922684810
  DYFYCGSPLYGGLSPQRIREWIAYHVRLFGEKSHFVIYDAGGVHEEVFQVLKPWMDLGYVTLHDIKEQERYDGYYHNQFLVVNDCLHRYKFMAKWMFFFD
  VDEYIFVPPKNTIKSVLDSLMGYNQFTIEQMHMNSQLCFAGDSGKAHRKWGFEKLVYKDVKRGIRRDRKYAVQPRNVYAAGVHMSQNLYGRTTHKTEGKI
  KYYHYHGTIAQRTE
Full Sequence
Protein Sequence     Length: 530     Download
MATNKERENQ KDRGGEKKML VGVIWNCAAE LKLILVALLI LCSVATLLQF LPSRFTISTS    60
DLRLCISKIP SQTDPTADTN TNTNTNIPSQ RLQIQQQAPP PQQQPPPTPP PPPAVEHDQI    120
LNNSVLKRAF NPYGAAAYNF ITMGSYRGGF GTFAIVGLSS KPLHVYGKPA YQCEWVPQND    180
TKKSTFAKYT YKMLPDWGYG RVYTVVIVNC TFAEPVNDDN SGGTLYLHAS TAGGGDANFN    240
LTDVVFALEE KPGSVDFSVY RTYEPKYDYF YCGSPLYGGL SPQRIREWIA YHVRLFGEKS    300
HFVIYDAGGV HEEVFQVLKP WMDLGYVTLH DIKEQERYDG YYHNQFLVVN DCLHRYKFMA    360
KWMFFFDVDE YIFVPPKNTI KSVLDSLMGY NQFTIEQMHM NSQLCFAGDS GKAHRKWGFE    420
KLVYKDVKRG IRRDRKYAVQ PRNVYAAGVH MSQNLYGRTT HKTEGKIKYY HYHGTIAQRT    480
EPCTTFINWT RYNFENTPYV LDITMRAVAG AVKKFELAKI GDRLKHTRQ* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13704Glyco_tranf_2_41.0e-5284384103+
pfam01697Glyco_transf_921.0e-27267460208+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_193750.1015291504unknown protein [Arabidopsis thaliana]
RefSeqNP_199280.1055293519unknown protein [Arabidopsis thaliana]
RefSeqXP_002263686.1015291526PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002299381.101435291387predicted protein [Populus trichocarpa]
RefSeqXP_002533995.101652917520conserved hypothetical protein [Ricinus communis]
Transmembrane Domains
StartEnd
2042
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EY7140042952105040
HO7805324141205300
CX5453702652665300
CK9382552591143720
HO7963983791555300
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s32_144V6.1Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1
Pp1s25_268V6.1Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)