y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10014929m |
Family | GH14 |
Protein Properties | Length: 520 Molecular Weight: 59130.1 Isoelectric Point: 4.8642 |
Chromosome | Chromosome/Scaffold: 2 Start: 21317980 End: 21320849 |
Description | beta-amylase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 22 | 441 | 0 |
YVMLPLGVITNDNVLEDKDKLESQLKELKAAGVDGIMVDVWWGIIESKGPRQYDWSAYRSLFELIQQYELKLQAIMSFHQCGGNVGDVVTIPIPKWVLEI GETNPDIFYTNRSGNRNKEYLTIGVDHKPLFDGRTAIEIYSDYMKSFRKNMFDFLEAGVIIDIEVGLGPAGELRYPSYPESQGWVFPGIGEFQCYDKYLK AEFKEAATASGHPEWELPDNAGTYNDKPESTEFFKTNGTYLSEQGNFFLTWYSNKLMFHGDEILDEANKAFLGCKVKLAAKVSGIHWWYLADNHAAEITA GYYNLNDRDGYRPIARILSRHYGILNFTCLEMRNSEQDAAAKCGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQILLNARPNGVNKEGPPKLRMY GVTYLRLSDDLLAENNFKIF |
Full Sequence |
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Protein Sequence Length: 520 Download |
MQASPAALTY DEKMLPNYVP IYVMLPLGVI TNDNVLEDKD KLESQLKELK AAGVDGIMVD 60 VWWGIIESKG PRQYDWSAYR SLFELIQQYE LKLQAIMSFH QCGGNVGDVV TIPIPKWVLE 120 IGETNPDIFY TNRSGNRNKE YLTIGVDHKP LFDGRTAIEI YSDYMKSFRK NMFDFLEAGV 180 IIDIEVGLGP AGELRYPSYP ESQGWVFPGI GEFQCYDKYL KAEFKEAATA SGHPEWELPD 240 NAGTYNDKPE STEFFKTNGT YLSEQGNFFL TWYSNKLMFH GDEILDEANK AFLGCKVKLA 300 AKVSGIHWWY LADNHAAEIT AGYYNLNDRD GYRPIARILS RHYGILNFTC LEMRNSEQDA 360 AAKCGPQELV QQVLSGGWRE NIEVAGENAL SRYDATAYNQ ILLNARPNGV NKEGPPKLRM 420 YGVTYLRLSD DLLAENNFKI FKIFVKKMHA DQDYCPDPQK YNHEIDPLER SKPKFSNEEL 480 MEATKKLLPF PWDEETDMNV GGTRGILAAL FGKIFSMFK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02705 | PLN02705 | 1.0e-135 | 18 | 407 | 393 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-158 | 19 | 437 | 423 | + beta-amylase; Provisional | ||
PLN02905 | PLN02905 | 1.0e-158 | 18 | 451 | 438 | + beta-amylase | ||
PLN02803 | PLN02803 | 2.0e-176 | 19 | 437 | 422 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 5 | 519 | 516 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK30294.1 | 0 | 1 | 519 | 1 | 514 | AF353207_1 beta-amylase [Castanea crenata] |
Swiss-Prot | O22585 | 0 | 9 | 502 | 3 | 496 | AMYB_MEDSA RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
Swiss-Prot | O64407 | 0 | 9 | 502 | 3 | 496 | AMYB_VIGUN RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
RefSeq | XP_002327920.1 | 0 | 10 | 518 | 7 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515712.1 | 0 | 1 | 518 | 1 | 516 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 9 | 502 | 2 | 495 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1q6c_A | 0 | 9 | 502 | 2 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 9 | 502 | 2 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1wdr_A | 0 | 9 | 502 | 2 | 495 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1v3i_A | 0 | 9 | 502 | 2 | 495 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777976 | 494 | 10 | 502 | 0 |
HO803971 | 396 | 97 | 492 | 0 |
HO782669 | 385 | 114 | 498 | 0 |
DY261326 | 310 | 1 | 308 | 0 |
FC926960 | 253 | 1 | 253 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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