y
Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10015218m |
Family | GT14 |
Protein Properties | Length: 451 Molecular Weight: 51553.5 Isoelectric Point: 9.3313 |
Chromosome | Chromosome/Scaffold: 2 Start: 19525671 End: 19529543 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT14 | 106 | 362 | 0 |
LAYLISGTKGDSHRMMRTLQAVYHPRNHYILHLDLEAPPRERLDLALSVKNDPIFFEVENVRVMLQSNLVTYKGPTMIACTLQAIAILLKESLEWDWFIN LSASDYPLVTQDDMLYVFSNMSKNLNFIEHTLISGWKLNQRAKPIIVDPGLYLSKKSDIAWTTQRRSLPTSFKLFTGSAWVMLTRRFVEYCIWGWDNLPR TLLMYYTNFISSPEGYFHTVICNTEEFRNTAISHDLHYIAWDNPPKQHPVKLTMKDF |
Full Sequence |
---|
Protein Sequence Length: 451 Download |
MRKLYRNLML MKNPLMNVRK TGHSHSGRMF SDRKWMVPFF ASLLVSIMLL LSATFGLFTS 60 SFSGDPLPFD IISFAKSDDS SGYFVESDIN KSFVTNGTAR TEPPRLAYLI SGTKGDSHRM 120 MRTLQAVYHP RNHYILHLDL EAPPRERLDL ALSVKNDPIF FEVENVRVML QSNLVTYKGP 180 TMIACTLQAI AILLKESLEW DWFINLSASD YPLVTQDDML YVFSNMSKNL NFIEHTLISG 240 WKLNQRAKPI IVDPGLYLSK KSDIAWTTQR RSLPTSFKLF TGSAWVMLTR RFVEYCIWGW 300 DNLPRTLLMY YTNFISSPEG YFHTVICNTE EFRNTAISHD LHYIAWDNPP KQHPVKLTMK 360 DFDKMVKSNA PFARKFAKDD PVLDKIDKEL LGRTNRFAPG AWCIGSSEGG ADPCTLRGND 420 SMFRPGPGAE RLQALLQTLL SEDFRKKQCS * 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-79 | 106 | 366 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 27 | 449 | 428 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94571.1 | 0 | 9 | 450 | 1 | 442 | unknown [Populus trichocarpa] |
GenBank | ACU20235.1 | 0 | 18 | 449 | 1 | 431 | unknown [Glycine max] |
RefSeq | XP_002319376.1 | 0 | 18 | 450 | 1 | 433 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329401.1 | 0 | 18 | 450 | 1 | 433 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517977.1 | 0 | 11 | 450 | 1 | 439 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000005 | 122 | 326 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000005 | 122 | 326 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000005 | 122 | 326 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000005 | 122 | 326 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000002 | 122 | 326 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |