Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10015383m |
Family | GH1 |
Protein Properties | Length: 419 Molecular Weight: 48016.3 Isoelectric Point: 5.57 |
Chromosome | Chromosome/Scaffold: 2 Start: 29493303 End: 29498475 |
Description | beta glucosidase 42 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 21 | 395 | 0 |
KTHFPPNFVFGVATSAYQIEGACEEGNRGASIWDDFTHTEGKIIDKSNGDVAVDHYHRYKEDIDLIAKLGFDAYRFSISWSRIFPDGLGTKINMEGITFY NNIIDALLQKGIQPYVTLYHWDLPLHLHESMGGWLNKEIVKYFEIYADTCFASFGDRVKNWITINEPLQTAVNGYCTGIFAPGRHQHSSTEPYLVAHHQI LAHAAAFSLYQRKYKDKQGGNIGLVVDCEWAEANSDKIEDKSAAARRLDFQIGWYLHPIYYGDYPEVMRNNLGDQLPKFMQKDKELVRNSLDFVGLNHYT SRFIAHATKSPEEGSFYEAQEMERLVEWEGGEVIGEKAASEWLYVVPWGLRKVLNYIAKTYNNPPIYVTENGMCI |
Full Sequence |
---|
Protein Sequence Length: 419 Download |
MVKKEELLKE YEQVEPTNVS KTHFPPNFVF GVATSAYQIE GACEEGNRGA SIWDDFTHTE 60 GKIIDKSNGD VAVDHYHRYK EDIDLIAKLG FDAYRFSISW SRIFPDGLGT KINMEGITFY 120 NNIIDALLQK GIQPYVTLYH WDLPLHLHES MGGWLNKEIV KYFEIYADTC FASFGDRVKN 180 WITINEPLQT AVNGYCTGIF APGRHQHSST EPYLVAHHQI LAHAAAFSLY QRKYKDKQGG 240 NIGLVVDCEW AEANSDKIED KSAAARRLDF QIGWYLHPIY YGDYPEVMRN NLGDQLPKFM 300 QKDKELVRNS LDFVGLNHYT SRFIAHATKS PEEGSFYEAQ EMERLVEWEG GEVIGEKAAS 360 EWLYVVPWGL RKVLNYIAKT YNNPPIYVTE NGMCINFSVE VILIIGLQFQ FLNRINEK* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 6.0e-111 | 20 | 392 | 385 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 6.0e-111 | 20 | 393 | 385 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-114 | 24 | 400 | 384 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 4.0e-140 | 25 | 396 | 372 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-150 | 24 | 400 | 380 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 4 | 393 | 3 | 392 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 1 | 393 | 1 | 394 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_198505.2 | 0 | 16 | 393 | 13 | 391 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270406.1 | 0 | 18 | 393 | 554 | 928 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514775.1 | 0 | 4 | 393 | 5 | 402 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 19 | 393 | 12 | 397 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gnp_A | 0 | 19 | 393 | 12 | 397 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3gno_A | 0 | 19 | 393 | 12 | 397 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 19 | 393 | 15 | 394 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 19 | 393 | 15 | 394 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HE645214 | 337 | 41 | 375 | 0 |
FP028268 | 296 | 67 | 362 | 0 |
FC909914 | 243 | 1 | 243 | 0 |
DY274414 | 243 | 1 | 243 | 0 |
DT509401 | 287 | 3 | 289 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|