| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10015387m |
| Family | GT48 |
| Protein Properties | Length: 417 Molecular Weight: 47923.4 Isoelectric Point: 9.3212 |
| Chromosome | Chromosome/Scaffold: 2 Start: 33418519 End: 33420477 |
| Description | glucan synthase-like 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1 | 276 | 0 |
| MVIITVYTFLWGRLYLALSGVEKAVKNSTNNKALSTLLNQQFLVQFGLFTALPMIVENSLEHGFLPAVWDFLTMQLQLASLFYTFSLGTRAHFFGRTILH GGAKYRATGRGFVVQHKSFSENYRLYSRSHFVKAIELGVILIVYAFHSPVAEDTFVYIAMSITSWFLVVSWMMSPFVFNPSGFDWLKTVYDFDDFIDWIW FRGVFTKADQSWETWWYEEQDHLRTTGLWGKLLEIILDLRFFFFQYGIVYQLGIAGGSTSIVVYLLSWIVMVVVVA | |||
| Full Sequence |
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| Protein Sequence Length: 417 Download |
| MVIITVYTFL WGRLYLALSG VEKAVKNSTN NKALSTLLNQ QFLVQFGLFT ALPMIVENSL 60 EHGFLPAVWD FLTMQLQLAS LFYTFSLGTR AHFFGRTILH GGAKYRATGR GFVVQHKSFS 120 ENYRLYSRSH FVKAIELGVI LIVYAFHSPV AEDTFVYIAM SITSWFLVVS WMMSPFVFNP 180 SGFDWLKTVY DFDDFIDWIW FRGVFTKADQ SWETWWYEEQ DHLRTTGLWG KLLEIILDLR 240 FFFFQYGIVY QLGIAGGSTS IVVYLLSWIV MVVVVAIYIT IAYAQNKYAA KDHIYYRLVQ 300 LLVIVLVVLV IVLLLEFTKF DFFDLVTSLL AFIPTGWGMI LIAQVLRPFL QSTLVWDTVV 360 SLARLYELLF GVIVMAPMAL LSWLPGFQSM QTRILFNQAF SRGLQISRIL TGKKSN* 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02364 | Glucan_synthase | 8.0e-68 | 1 | 259 | 295 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK93667.2 | 0 | 11 | 415 | 1 | 407 | putative glucan synthase [Arabidopsis thaliana] |
| RefSeq | XP_002330632.1 | 0 | 1 | 415 | 1081 | 1497 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002458504.1 | 0 | 1 | 416 | 185 | 604 | hypothetical protein SORBIDRAFT_03g034880 [Sorghum bicolor] |
| RefSeq | XP_002517916.1 | 0 | 1 | 415 | 890 | 1307 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002519064.1 | 0 | 1 | 416 | 1172 | 1586 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Transmembrane Domains | ||||
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| Start | End | |||
| 129 | 151 | |||
| 156 | 178 | |||
| 261 | 283 | |||
| 293 | 315 | |||
| 328 | 350 | |||
| 365 | 387 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EB432490 | 312 | 56 | 366 | 0 |
| CX667461 | 281 | 17 | 295 | 0 |
| GO861335 | 262 | 1 | 258 | 0 |
| JG911511 | 272 | 27 | 297 | 0 |
| EX685994 | 218 | 45 | 261 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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