Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10016863m |
Family | CBM43 |
Protein Properties | Length: 185 Molecular Weight: 19114.2 Isoelectric Point: 4.5888 |
Chromosome | Chromosome/Scaffold: 2 Start: 10795982 End: 10797667 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 43 | 126 | 1.9e-33 |
WCVAKNNADDAALQGALDWACGPGGADCSPIQQGGPCYNPNDVQTMASYAFNDYYLKNGMTDDSCSFGNNAAVTSLNPSRGSCK |
Full Sequence |
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Protein Sequence Length: 185 Download |
MSLPNFSLFL FLSIIFHAVS LVVEAQNGNG GRGGGVSVST QLWCVAKNNA DDAALQGALD 60 WACGPGGADC SPIQQGGPCY NPNDVQTMAS YAFNDYYLKN GMTDDSCSFG NNAAVTSLNP 120 SRGSCKFPSS SSGKNGSGSD SNSSTTTVGV GSDSAGLSGC SQIVLTWFWP LITIHLFMVI 180 THTF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-21 | 42 | 113 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-37 | 42 | 127 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 0 | 1 | 141 | 44 | 180 | unknown [Arabidopsis thaliana] |
EMBL | CAB68148.1 | 0 | 1 | 143 | 79 | 217 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 0 | 1 | 143 | 3 | 141 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 0 | 17 | 180 | 18 | 170 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525141.1 | 0 | 31 | 166 | 21 | 155 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-18 | 43 | 132 | 13 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |