Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10017518m |
Family | CBM43 |
Protein Properties | Length: 119 Molecular Weight: 13019.1 Isoelectric Point: 7.2424 |
Chromosome | Chromosome/Scaffold: 2 Start: 34921846 End: 34922436 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 37 | 114 | 2.7e-27 |
WCVAKPSSSEAELAANINFACNQIQNCNIIQEGGPCYYPNTAINHASVVMNLYYQLDGRNNWNCDFRASGLTTLSDPS |
Full Sequence |
---|
Protein Sequence Length: 119 Download |
MAKKVLSLHF LPLLLLLFFF ASGGILKLAN GQEMKTWCVA KPSSSEAELA ANINFACNQI 60 QNCNIIQEGG PCYYPNTAIN HASVVMNLYY QLDGRNNWNC DFRASGLTTL SDPSMLLV* 120 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-16 | 36 | 102 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-29 | 36 | 115 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14756.1 | 2e-33 | 1 | 114 | 1 | 115 | unknown [Glycine max] |
EMBL | CBI30841.1 | 7e-34 | 22 | 114 | 82 | 171 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275460.1 | 1e-33 | 1 | 114 | 1 | 111 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519703.1 | 5e-38 | 24 | 114 | 30 | 118 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002528491.1 | 2e-37 | 11 | 114 | 8 | 110 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-24 | 32 | 114 | 8 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |