y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10017969m |
Family | CBM43 |
Protein Properties | Length: 89 Molecular Weight: 9740.16 Isoelectric Point: 7.8332 |
Chromosome | Chromosome/Scaffold: 2 Start: 34933276 End: 34933542 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 3 | 80 | 1e-27 |
WCIANPLTNISALLGNLDFACSHVDCQLIQQGCSCFYPNTPIHHASFAMNLYFQVMGRHSSHCDFRGSGLISSTDPSK |
Full Sequence |
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Protein Sequence Length: 89 Download |
RTWCIANPLT NISALLGNLD FACSHVDCQL IQQGCSCFYP NTPIHHASFA MNLYFQVMGR 60 HSSHCDFRGS GLISSTDPSK PLKLLLNN* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-15 | 2 | 71 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-26 | 2 | 77 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002275460.1 | 2e-27 | 1 | 79 | 33 | 111 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300444.1 | 3e-28 | 1 | 79 | 30 | 108 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333741.1 | 9e-28 | 1 | 79 | 2 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519722.1 | 9e-32 | 1 | 79 | 30 | 108 | hypothetical protein RCOM_0633850 [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-19 | 2 | 79 | 12 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY745502 | 77 | 1 | 77 | 0 |
EE255611 | 77 | 1 | 77 | 2e-29 |
FQ362276 | 77 | 1 | 77 | 2e-26 |
EE255611 | 73 | 1 | 73 | 4e-21 |
EY745502 | 67 | 2 | 68 | 0.000000000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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