Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10017977m |
Family | GH3 |
Protein Properties | Length: 735 Molecular Weight: 80994.8 Isoelectric Point: 6.2736 |
Chromosome | Chromosome/Scaffold: 2 Start: 34942463 End: 34945203 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 57 | 275 | 0 |
GVQRLGLPKYEWWSEALHGVSNVGPGTYFDDLVPGATSFPTVILTTASFNESLWKTIGQAVSTEARAMYNLGRAGLTFWSPTINVLRDPRWGRATETPGE DPFIVGKYAANYVRGLQDVEGHDNYTDPNSRPLKVSSCCKHYAAYDVDNWSGVDRFHFDARVTEQDMVETFLRPFEMCVKEGDASSIMCSYNRVNGIPTC ADPKLLNQTVRGEWDLHGT |
Full Sequence |
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Protein Sequence Length: 735 Download |
SNFTYVCDPK RLDDLGLEMS SFSFCDSSLP YPVRVKDLVD RMTIDEKVLQ LGNHGKGVQR 60 LGLPKYEWWS EALHGVSNVG PGTYFDDLVP GATSFPTVIL TTASFNESLW KTIGQAVSTE 120 ARAMYNLGRA GLTFWSPTIN VLRDPRWGRA TETPGEDPFI VGKYAANYVR GLQDVEGHDN 180 YTDPNSRPLK VSSCCKHYAA YDVDNWSGVD RFHFDARVTE QDMVETFLRP FEMCVKEGDA 240 SSIMCSYNRV NGIPTCADPK LLNQTVRGEW DLHGTLKAGL DLDCGDYYPD FTGSAFRQGK 300 VREADVDKSL KYLYTVLMRL GWFDGHPQYK SLGKADVCAD EHIELAADAA RQGIVLLKND 360 NDTLPLSTSK FRNLAVVGPH ANATSAMLGN YAGAPCRYRA PIDGFAAYGK VSYAMGCGEA 420 MCKNESLIFP AVRAAKKADA TIIVAGLDMT IEAESLDREN LTLPGYQTQL INQVTEAAKG 480 PVILVIMSAG GVDISFAKDN TKIKAILWAG YPGEEGGRAI ADIVFGKHNP GGRLPITWYE 540 EEYAQKLPMT SLQLRPIDSL GYPGRTYKFF NGSTVYPFGH GLSYTKFNYT NLKTSKRAIH 600 IKLSKFNHCH NLNYTSGVYQ PPCPAMIVDD LKCHDYQYDF EVEVLNVGKR DGSEVIIVYS 660 QPPNELAASP IKQVIGFQRV SVPAGESQKV KFKYNVCESL QIVDSSAQIV LPSGGHTILV 720 GDSGVSFPIH VYFD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-43 | 60 | 417 | 389 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-52 | 53 | 316 | 292 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-65 | 354 | 585 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-77 | 35 | 723 | 784 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 20 | 722 | 749 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 2 | 722 | 44 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 2 | 733 | 45 | 803 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 2 | 733 | 48 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 37 | 733 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 1 | 733 | 45 | 801 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u4a_B | 0 | 35 | 721 | 7 | 722 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3u4a_A | 0 | 35 | 721 | 7 | 722 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3u48_B | 0 | 35 | 721 | 7 | 722 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3u48_A | 0 | 35 | 721 | 7 | 722 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2x41_A | 8.99999e-40 | 58 | 733 | 46 | 711 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ803048 | 257 | 376 | 632 | 0 |
BX837031 | 315 | 1 | 287 | 0 |
BX838810 | 326 | 1 | 298 | 0 |
GW867030 | 316 | 38 | 325 | 0 |
GW617743 | 221 | 353 | 573 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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