Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10017983m |
Family | GH17 |
Protein Properties | Length: 317 Molecular Weight: 34217.2 Isoelectric Point: 4.2984 |
Chromosome | Chromosome/Scaffold: 2 Start: 7242361 End: 7243311 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 6 | 315 | 0 |
IGVCYGRVANNLPSDQEVVDLYHANGITKMRIYDPNEPTLQALRGSNIELMLGVANGDIQALSDPSAASSWVQNNILAFTPDVVFRYIAVGNEISPSDQA ASFVLPAMQNIYNAIVSANLQDQIKVSTAMQTSLLGNSYPPSAGSFADNANSYIGPIVQFLKQTGAPLLANVYPYFSYIGDTKDIRLDYALFTSQGTLVQ DGSLGYQNLFDASLDALYSALEKAGVPDLEVVVSETGWPSEGGEAATVDNASTYYKNVINHVSAGTPKRPGKVIETYLFAMFDENQKGPAETERHFGLFS PNKQSKYELD |
Full Sequence |
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Protein Sequence Length: 317 Download |
AQTRPIGVCY GRVANNLPSD QEVVDLYHAN GITKMRIYDP NEPTLQALRG SNIELMLGVA 60 NGDIQALSDP SAASSWVQNN ILAFTPDVVF RYIAVGNEIS PSDQAASFVL PAMQNIYNAI 120 VSANLQDQIK VSTAMQTSLL GNSYPPSAGS FADNANSYIG PIVQFLKQTG APLLANVYPY 180 FSYIGDTKDI RLDYALFTSQ GTLVQDGSLG YQNLFDASLD ALYSALEKAG VPDLEVVVSE 240 TGWPSEGGEA ATVDNASTYY KNVINHVSAG TPKRPGKVIE TYLFAMFDEN QKGPAETERH 300 FGLFSPNKQS KYELDN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 236 | 308 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-160 | 6 | 315 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3EM5 | 0 | 6 | 315 | 2 | 314 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
DDBJ | BAE53383.1 | 0 | 6 | 314 | 36 | 340 | beta-1,3-glucanase [Sesbania rostrata] |
RefSeq | XP_002299791.1 | 0 | 4 | 314 | 26 | 335 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 1 | 314 | 8 | 320 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513528.1 | 0 | 4 | 314 | 31 | 340 | Lichenase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 6 | 315 | 2 | 314 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3f55_C | 0 | 6 | 315 | 2 | 314 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3f55_B | 0 | 6 | 315 | 2 | 314 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3f55_A | 0 | 6 | 315 | 2 | 314 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3em5_D | 0 | 6 | 315 | 2 | 314 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779722 | 309 | 6 | 314 | 0 |
DY932502 | 308 | 6 | 311 | 0 |
HO781618 | 311 | 6 | 312 | 0 |
DY932509 | 301 | 6 | 304 | 0 |
DY278959 | 309 | 6 | 311 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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