CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10018038m
FamilyCBM57
Protein PropertiesLength: 1002 Molecular Weight: 109845 Isoelectric Point: 5.8897
ChromosomeChromosome/Scaffold: 2 Start: 30719029 End: 30725506
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM573865533.3e-28
  SIKCGSPEMRADNIVYEGDNSYLGASAFVVTNTEKWAVSKVGLFNERENPAYVLNTLAQVTGTRTPELYQTSRISAGSLRYYGLGLVNGPYNVSLLFAET
  NFPDPSTERWESLGRRVFDIYVQGRLQWKDFDISKEAGGPNRAIIKNFSATVSENHLEIHLFWAGKGT
Full Sequence
Protein Sequence     Length: 1002     Download
RALNSILQQW DAPAVPLWNI SGEPCSGSAL NATDSEFESP DNNPAIVCDC TFDNGATCHI    60
TKLRVYALNK KGVIPEELVT LQYLTFLKID QNFFTGPLPS FIGNLSRLML LSVAHNGFSG    120
PVPRELGNLK ELTILSFGTN DFSGTLPPEL GNLAKLEQLY INSCGAGGEI PSTFAKLRSM    180
QTLWASDAPF TGKIPDFIGN WTKLKSLRFQ GNSFQGPIPS SLSKLASLES LRISDIYNVS    240
SSLDFVMSLK NLTDLSLRHA LITGTIPSRI GDLQMLQILD LSFNNLTGQI PATLFNISSL    300
NYLFLGNNSL SGTLPDEKSE KLQKIDLSHN HLSGTFPSWA TSELQMNLAV NNFKFDISNI    360
SVFPGLSCLQ RNFPCNRNAP QYANFSIKCG SPEMRADNIV YEGDNSYLGA SAFVVTNTEK    420
WAVSKVGLFN ERENPAYVLN TLAQVTGTRT PELYQTSRIS AGSLRYYGLG LVNGPYNVSL    480
LFAETNFPDP STERWESLGR RVFDIYVQGR LQWKDFDISK EAGGPNRAII KNFSATVSEN    540
HLEIHLFWAG KGTCCIPEQG NYGPAISALS VVSAFPPTAS GLPPSTPGKK SHTGLIVGIA    600
VPLGILGSVV ISIVFYMRRE KDNDDEEVLV GIGSKPNIFS YAELRSATKD FDPSNKLGEG    660
GYGPVYKGTL SDGRVIAVKQ LSIASHQGKN QFVNEIATIS AVQHRNLVRL YGCCIEGARR    720
LLVYEYLENK SLDQVLFGDH ELRLDWPTRF SICLGTARGL AYLHEESRPR IVHRDVKASN    780
ILLDAELCPK ISDFGLAKLF DDKKTHISTR VAGTIGYLAP EYAMRGHLTE KADVFSFGVV    840
ALEMISGRAN SDNSLDTEKI YLLEWAWNLH ENNQSLGLVD PTLTEFNDKE ALRVIGVALL    900
CTQASPMMRP PMSRVVAMLA GDVEVGTVIS RPSYLTDWDF KDITASFLNE DTPTPSSSNK    960
RSNSKEKSER ENPVDDHSEG TNALVSPVNV TQLSDIIAEG R* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00192PTKc2.0e-46655846207+
smart00221STYKc6.0e-47656846197+
smart00219TyrKc1.0e-48656846197+
cd00180PKc4.0e-51657844192+
pfam11721Malectin2.0e-54384569190+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI39026.1011001491037unnamed protein product [Vitis vinifera]
RefSeqXP_002272404.10110014994PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002273016.1011001491048PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002297945.1021001461041predicted protein [Populus trichocarpa]
RefSeqXP_002303698.1021001211016predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A06239227309A Chain A, The Structure Of Soybean Peroxidase
PDB3uim_A06239227309A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H062392215317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G062392215317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D062392215317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
594616
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY2614703005828810
FC9274582775828580
DY26871227812780
GO2422023115148240
DY268712472763211.3
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10012587mCarubv10010895mCarubv10008256mCarubv10008071m.409.563
Carubv10008071m.409.563Carubv10008183m
Citrus clementinaCiclev10007054mCiclev10007687mCiclev10007686mCiclev10018029mCiclev10014641m
Ciclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10300.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2
LOC_Os04g52640.1LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1
LOC_Os08g10330.1LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3
LOC_Os05g17604.2LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2
LOC_Os08g10320.1LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1
LOC_Os05g16930.1LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4
LOC_Os05g16824.3LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013608001GSVIVT01013612001
GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)