Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10018262m |
Family | GH3 |
Protein Properties | Length: 793 Molecular Weight: 87053.9 Isoelectric Point: 5.9488 |
Chromosome | Chromosome/Scaffold: 2 Start: 29821622 End: 29824705 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 87 | 343 | 0 |
GVPRLGLPQYEWWSEALHGVSNVGPGTHFDDVVPGATSFPTVILTTASFNESLWKKIGRAVSTEARAMYNLGRAGLTYWSPNINVARDPRWGRITETPGE DPFVVGRYAVNYVRGLQDVEGHENATDLNSRPLKVSSCCKHYAAYDVDNWKGVDRYHFDARVTEQDMEETFLRPFEMCVKEGDASSVMCSYNRVNGIPSC ADPKLLNQTVRGEWDLHGYIVADCDSIQVMVDNHKFLADSKEDAVAQTLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 793 Download |
MAKVVSFLIC FSLSIALLVF STNAVNANDS SSPVYVCDPA RFTKLGLQMS SFLFCDSSLP 60 YSVRVKDLVS RMTLDEKVQQ LGDFAHGVPR LGLPQYEWWS EALHGVSNVG PGTHFDDVVP 120 GATSFPTVIL TTASFNESLW KKIGRAVSTE ARAMYNLGRA GLTYWSPNIN VARDPRWGRI 180 TETPGEDPFV VGRYAVNYVR GLQDVEGHEN ATDLNSRPLK VSSCCKHYAA YDVDNWKGVD 240 RYHFDARVTE QDMEETFLRP FEMCVKEGDA SSVMCSYNRV NGIPSCADPK LLNQTVRGEW 300 DLHGYIVADC DSIQVMVDNH KFLADSKEDA VAQTLKAGLD LDCGQYYTNF TGNAVQQGKV 360 KETDIDKSLK YLYTVLMRLG FFDGSPQYVS LGKKDICSDE NIELAAEAAR EGIVLLKNDQ 420 NTLPLNSAKV KTVAVVGPHA NATVAMIGNY AGIPCRYMSP IAGFSAYANV TYETGCDDVA 480 CKSNNSIFAA SEAAKTADAT IILAGLDLSV EAESLDREDL WLPGYQTQLI NQVAEVAKGP 540 VILVIMSAGG VDIAFAETNT NIKAILWAGY PGEEGGRAIA AAVFGKFNPG GRLPITWYIG 600 DYVQMLPLTS MPLRPVDSLG YPGRTYKFYN GPTLYPFGYG LSYTQFKYNL LSFTKTIHVN 660 LNKLQHCRNL NYTSDASKTR CPGVLVNDLR CDDYFEFKVD VQNVGSTDGS DVVIVYSKPP 720 AEIAATYIKQ VIGFQRVFVR AGRNKRIKFV FNACKSLNIV DYAANTLLPA GEHTIFVGNG 780 GVSFPIHLNF NY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-53 | 413 | 644 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-55 | 76 | 441 | 375 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-63 | 73 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-70 | 65 | 749 | 752 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 13 | 779 | 784 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 35 | 792 | 47 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 35 | 791 | 48 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 35 | 790 | 51 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 67 | 790 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 19 | 791 | 29 | 802 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 65 | 778 | 7 | 722 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3u48_A | 0 | 65 | 778 | 7 | 722 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3u4a_B | 0 | 65 | 778 | 7 | 722 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3u4a_A | 0 | 65 | 778 | 7 | 722 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 2x41_A | 9.99995e-41 | 64 | 654 | 3 | 611 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |