Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10018271m |
Family | GH3 |
Protein Properties | Length: 609 Molecular Weight: 67213.1 Isoelectric Point: 7.7571 |
Chromosome | Chromosome/Scaffold: 2 Start: 777114 End: 779235 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 80 | 316 | 0 |
MATRLGIPMIYGVDAVHGHNNVYKATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDAKLVQQFSVIISGLQ GDAPSKQVKKGRPFVGGKDKVAACAKHYVGDGGTVNGINENNTIVTTEQLFDIHMPPYWSALDQRVSTVMISYSSINGKKMHANKELVTEYLKERLKFKG FTISDWEGIDRITSPPHSNYTYSVQESVLAGLDMIMV |
Full Sequence |
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Protein Sequence Length: 609 Download |
MIYKDPKQPV EVRVKDLLSR MTLAEKIGQM TQIERVNATF DAMKNYFIGS VLSGGGSVPS 60 PNATAQQWID MVNDIQRGAM ATRLGIPMIY GVDAVHGHNN VYKATIFPHN VGLGATRDPN 120 LVKRIGAATA LEVRATGIPY AFAPCIAVCR DPRWGRCYES YSEDAKLVQQ FSVIISGLQG 180 DAPSKQVKKG RPFVGGKDKV AACAKHYVGD GGTVNGINEN NTIVTTEQLF DIHMPPYWSA 240 LDQRVSTVMI SYSSINGKKM HANKELVTEY LKERLKFKGF TISDWEGIDR ITSPPHSNYT 300 YSVQESVLAG LDMIMVPYLY PEFINILTDL VNKKVIPMRR INDAVKRILR VKFEMGLFEN 360 PYADNSFVNK LGCKEHRELA REAVRKSLVL LKNGKQQSPP VLPLEEKLPK ILVAGTHADN 420 LGYQCGGWTI EWQGDSGNNY TEGTTILRAI NATVDPSTQV VFSERPDYNF VKDNNFSIGI 480 VVVGEVPYAE TKGDNTNLTL PWPAPDIINN VCKATKCVVV LVSGRPLVIE PYVEAMDALV 540 AAWLPGSEGQ GVADALFGDS PFTGKLSRTW FRRIDQVPMN LGDQNYDPLF PFGFGLQTAP 600 PNESLLIN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-38 | 9 | 588 | 631 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-41 | 388 | 596 | 231 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-80 | 6 | 596 | 657 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-81 | 21 | 430 | 417 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-86 | 22 | 351 | 334 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR14129.1 | 0 | 3 | 603 | 27 | 625 | exo-beta-glucanase [Lilium longiflorum] |
GenBank | ABK95015.1 | 0 | 1 | 600 | 24 | 622 | unknown [Populus trichocarpa] |
RefSeq | NP_001051275.1 | 0 | 3 | 598 | 27 | 620 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130296.1 | 0 | 3 | 598 | 27 | 618 | exoglucanase1 [Zea mays] |
RefSeq | XP_002311926.1 | 0 | 1 | 602 | 27 | 634 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 1 | 598 | 3 | 599 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1x38_A | 0 | 1 | 598 | 3 | 599 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1lq2_A | 0 | 1 | 598 | 3 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 1 | 598 | 3 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 1 | 598 | 3 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 415 | 63 | 477 | 0 |
DY025530 | 300 | 92 | 391 | 0 |
FN998758 | 312 | 63 | 374 | 0 |
FN998735 | 318 | 46 | 363 | 0 |
HO784016 | 46 | 3 | 48 | 0.000000007 |
Sequence Alignments (This image is cropped. Click for full image.) |
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