| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10018742m |
| Family | GH116 |
| Protein Properties | Length: 945 Molecular Weight: 105638 Isoelectric Point: 5.9464 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20908233 End: 20915934 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH116 | 520 | 881 | 0 |
| GQFLYLEGAEYVMYNTYDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPGTMKIMSDGKWVARKFLGAVPHDIGLDDPWFEINSYNLFNSSRWKDLNS KFVLQVYRDFVATGDKTFARAVWPSVYIAMAYMEQFDKDGDGMIENEGFPDQTYDAWSANGVSAYCGGLWVAALQAASALANDVGDHASASYFWVRYQKA KAVYDSLWNGSYFNYDNSDGSSSTSIQADQLAGQWYARACGLLPIADEAKVKKALTKIYDFNVLKVKGGMCGAMNGMQPDGRIDMSGLQAREIWPGVTYG LAASMIQEEMVDMAFQTAAGVYEVAWSEDGLGYSFQTPESWNNNDEYRSLCYMRPLTIWAMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 945 Download |
| MENGVKEEGE NAASMPKVDP GQPPQLTWQR KLDSNVKVPT GFTLSFQEFR HLAHIGFRLY 60 RYSKQEEAKG KVPVFNVFRK HHITSDQGIP LGGIGAGSIG RSYRGEFQRF KLFHGICDDA 120 PVLANQFSVF VSRPNGEKFS SVLCPRSPGV PKKNTDSGIE SWDWNLKGEN CTYHALFPRA 180 WTVYDGEPDP ELRIVCRQIS PFIPHNYKES SFPASVFTFT LSNSGQTCAD VTLLFTWANS 240 VAGDSGLSGH HFNSKTMTKD GVHGLTLHHR TANGRPPVTF AIAAEETADV HVSECPCFLL 300 SGNSKGITAK DMWNEIKKHG SFDHLDNDKT SPSEPGSSIG AAIAASLTIP SGSTRSVTFS 360 LAWDCPEVKF FEKVYHRRYT KFYGTLGDSA ARIARDAILE HAKWECEIEA WQRPILEDKR 420 FPEWYPITLF NELYYLNAGG TIWTDGSPPM QSLATIRERK FSLDTPRSDN KNIFCADDEN 480 DTANGILGRM TSTLEQIHTP ASSDTALGTR LLENGEENIG QFLYLEGAEY VMYNTYDVHF 540 YSSFALVMLF PKLELSIQRD FAAAVMMHDP GTMKIMSDGK WVARKFLGAV PHDIGLDDPW 600 FEINSYNLFN SSRWKDLNSK FVLQVYRDFV ATGDKTFARA VWPSVYIAMA YMEQFDKDGD 660 GMIENEGFPD QTYDAWSANG VSAYCGGLWV AALQAASALA NDVGDHASAS YFWVRYQKAK 720 AVYDSLWNGS YFNYDNSDGS SSTSIQADQL AGQWYARACG LLPIADEAKV KKALTKIYDF 780 NVLKVKGGMC GAMNGMQPDG RIDMSGLQAR EIWPGVTYGL AASMIQEEMV DMAFQTAAGV 840 YEVAWSEDGL GYSFQTPESW NNNDEYRSLC YMRPLTIWAM QWALTKPKLS RQEIKHEISD 900 RDSSYLEQHA AFSKVASLLK LPKEEASKGF LKVVYDFTIG RVLW* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG4354 | COG4354 | 4.0e-29 | 86 | 445 | 371 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] |
| pfam12215 | GBA2_N | 6.0e-62 | 88 | 404 | 326 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. |
| COG4354 | COG4354 | 4.0e-68 | 519 | 886 | 387 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] |
| pfam04685 | DUF608 | 7.0e-161 | 520 | 882 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 1 | 942 | 1 | 947 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 1 | 942 | 6 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275782.1 | 0 | 1 | 942 | 17 | 963 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325943.1 | 0 | 55 | 944 | 4 | 891 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525532.1 | 0 | 1 | 942 | 2 | 946 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY292040 | 367 | 533 | 895 | 0 |
| DY268096 | 365 | 426 | 790 | 0 |
| DY290479 | 305 | 1 | 305 | 0 |
| FC895322 | 298 | 393 | 690 | 0 |
| DY294101 | 421 | 393 | 792 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
