Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10018959m |
Family | GH3 |
Protein Properties | Length: 771 Molecular Weight: 82721.3 Isoelectric Point: 8.1056 |
Chromosome | Chromosome/Scaffold: 3 Start: 46357700 End: 46364094 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 74 | 321 | 0 |
AAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPG EDPVLSGKYAASYVRGLQGSDGDRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKR TIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDC |
Full Sequence |
---|
Protein Sequence Length: 771 Download |
MASTIAFFFL GLILLSASSS GLAAREPFAC DPKDATTRTL PFCQVSLPIP QRVNDLIGRL 60 SLQEKVKLLI SGAAAVPRLG IKGYEWWSEA LHGVSNVGPG TKFGGDFPGA TSFPQVITTA 120 SSFNATLWEA IGRVVSDEAR AMYNGGTAGL TYWSPNVNIF RDPRWGRGQE TPGEDPVLSG 180 KYAASYVRGL QGSDGDRLKV AASCKHFTAY DLDNWNGVDR FHFNAKVSKQ DIEDTFDVPF 240 RMCVMEGKVA SVMCSYNQVN GVPTCADPNI LKRTIRGEWR LNGYIVSDCD SVGVYYDTQH 300 FTSTPEEAAA DAIRAGLDLD CGPFLGLHTE SAVQRGLLSE IDINNALVNT LTVQMRLGMF 360 DGEPSSQPYG HLGPKDVCTP DHQELALEAA RQGIVLLKNQ GPSLPLSHIR HRTVAVIGPN 420 SDVTVTMIGN YAGIACGYTT PLQGIGRYAR TIHQQGCKDV ACADDQLFGA AIDASRQADA 480 TILVMGLDQS IEAEALDRAG LLLPGRQQEL VSKVSMASKG PTILVLMSGG PIDVAFAKND 540 PRIAAIIWAG YPGQAGGTAI ADILFGTSNP GGKLPMTWYP QEYITNLPMT EMAMRPSQSK 600 RYPGRTYRFY KGPVVYPFGH GMSYTNFVHT VANAPTVVAV PLDGRHGSIN ATISGKAIKV 660 THAKCNRLTL GVQVDVKNVG SKDGAHTLLV FSTPPAGHWA PHKQLVAFEK VHVPAGAQQR 720 VGINIHVCKY LSVVDRSGTR RIPLGEHNIH IGGTKHSVSL HAATLGVIKS * 780 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-53 | 73 | 458 | 392 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-58 | 56 | 353 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-61 | 394 | 625 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-82 | 111 | 725 | 667 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 25 | 762 | 757 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 9 | 770 | 3 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 9 | 770 | 8 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 2 | 770 | 8 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 22 | 770 | 22 | 768 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 23 | 770 | 23 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 111 | 725 | 91 | 696 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u48_A | 0 | 111 | 725 | 91 | 696 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_B | 0 | 111 | 725 | 91 | 696 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_A | 0 | 111 | 725 | 91 | 696 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 2x41_A | 0 | 51 | 760 | 2 | 707 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |