| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10018992m |
| Family | AA3 |
| Protein Properties | Length: 749 Molecular Weight: 82284.1 Isoelectric Point: 6.8338 |
| Chromosome | Chromosome/Scaffold: 3 Start: 43127076 End: 43131063 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 225 | 744 | 1.3999e-42 |
| TVDHEHNLFEIKCDVVVVGSGCGGGVAAAVLASSGQKVLVLEKGNYFVAEDYSSLEGPSMLELYESGGLLSTLDGKFMVFAGSAVGGGSAVNWSACIETP DSVLRDWFVEHKIPLFGSLDYRAAMDKVSKRIGVTEHCTEEGFQNQVLRKGCENLGFKVESVARNTPEEHYCGSCNYGCRTGDKKGTDVTWLVDAVDNGA VILAGFKAEKFILVDNKDSIRSKKCLGVTATALNKNVTRKLQIKAKATISACGSLLTPPLMISSGLENPNIGTNLHLHPVLLAWGYIPDHVSELKGKTFE GGIITSIHKVVSEDSKVQAIIESPAMGPASFAASFPWISGRELKDRMLRYGRIAQLFALVRDQGSGEVKVEGKIKYRLSKNDKENLKTGLRQALRILVAA GAEEVGTYRSDGHRIRCKGIKEEDLEEFIGSIEVVGGMASRGEHWSVYFSAHQMGSCRMGATEEDGAVDENGESWEAEGLFVCDGSVLPSAIGINPMITI ESTSYCISKKIADSLKKDIP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 749 Download |
| MKGRESHPLL RGGRRASSYS HGFSSSEIES LAAICQTLVP PLPPETITKQ HSHNQAIVSF 60 YKASASQHPI PHEVAELMVK RGQPQAVFLA RLILTLLSFR LGTLLLCGYL CFDWNWPFIH 120 NFSEISLEKR EKILKNWSRE RYLLPLRVVF VMIKMFCLFY FFARTDEKSE NPAWEAIGYH 180 VDTREPSNKP RGERPLQKGI VETVHENEND HSLFQCLVDH GLQVTVDHEH NLFEIKCDVV 240 VVGSGCGGGV AAAVLASSGQ KVLVLEKGNY FVAEDYSSLE GPSMLELYES GGLLSTLDGK 300 FMVFAGSAVG GGSAVNWSAC IETPDSVLRD WFVEHKIPLF GSLDYRAAMD KVSKRIGVTE 360 HCTEEGFQNQ VLRKGCENLG FKVESVARNT PEEHYCGSCN YGCRTGDKKG TDVTWLVDAV 420 DNGAVILAGF KAEKFILVDN KDSIRSKKCL GVTATALNKN VTRKLQIKAK ATISACGSLL 480 TPPLMISSGL ENPNIGTNLH LHPVLLAWGY IPDHVSELKG KTFEGGIITS IHKVVSEDSK 540 VQAIIESPAM GPASFAASFP WISGRELKDR MLRYGRIAQL FALVRDQGSG EVKVEGKIKY 600 RLSKNDKENL KTGLRQALRI LVAAGAEEVG TYRSDGHRIR CKGIKEEDLE EFIGSIEVVG 660 GMASRGEHWS VYFSAHQMGS CRMGATEEDG AVDENGESWE AEGLFVCDGS VLPSAIGINP 720 MITIESTSYC ISKKIADSLK KDIPSAEN* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 0.005 | 676 | 737 | 62 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 0.0002 | 674 | 724 | 52 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 1.0e-17 | 360 | 746 | 425 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 1.0e-21 | 598 | 724 | 127 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 4.0e-75 | 284 | 504 | 224 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 19 | 741 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 4 | 741 | 3 | 737 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 5 | 741 | 8 | 748 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 4 | 741 | 3 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 1 | 741 | 1 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1naa_B | 0.000001 | 238 | 735 | 4 | 534 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.000001 | 238 | 735 | 4 | 534 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1kdg_B | 0.000002 | 238 | 735 | 9 | 539 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.000002 | 238 | 735 | 9 | 539 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 3t37_A | 0.0001 | 223 | 714 | 9 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
