Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10019349m |
Family | GT5 |
Protein Properties | Length: 612 Molecular Weight: 67293.6 Isoelectric Point: 8.4394 |
Chromosome | Chromosome/Scaffold: 3 Start: 255781 End: 258629 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 87 | 582 | 0 |
LVFVGAEVAPWSKTGGLGDVLGGLPPALAARGHRVMSVAPRYDQYKDAWDTSVLAEVKVGDSIETVRFFHCYKRGVDRVFVDHPVFLEKVWGKTGSKIYG PKAGLDYEDNQLRFSLLCQAALEAPRILNLNNNKYFSGPYGEDVLFIGNDWHTALLPCYLKFMYQSKGIHKNAKVAFCIHNIAYQGRFPFADFSLLNLPD DFRGAFDFIDGYDKPVKGRKINWMKAGILESDRVLTVSPHYAKELISGEEKGVELDNIIRKTGISGIVNGMDVQEWNPSTDRYINVNYDATTVMNAKPLV KEALQSQLGLPVDRNIPLIGFIGRLEEQKGSDILAQAIPKFMGGNVQIVVLGTGKKPMEQQIEQLEIICPEKARGITKFSTPLAHKIIAGADFMLVPSRF EPCGLIQLHAMRYGTVPIVASTGGLFDTVKEGITGFQMRSFHVECDRVDLADVAAIAKHVNRAVATYGTPALKEMIQNCMALDLSWKEPARLWEKM |
Full Sequence |
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Protein Sequence Length: 612 Download |
MATMTAPQFI GGSSQLTSGS VIKSNFSQIG LRSQSMTHSG LRSLNTIDRL QMKSYAKAVV 60 TKATKNGQQT PNNVPSKKII CQQGMNLVFV GAEVAPWSKT GGLGDVLGGL PPALAARGHR 120 VMSVAPRYDQ YKDAWDTSVL AEVKVGDSIE TVRFFHCYKR GVDRVFVDHP VFLEKVWGKT 180 GSKIYGPKAG LDYEDNQLRF SLLCQAALEA PRILNLNNNK YFSGPYGEDV LFIGNDWHTA 240 LLPCYLKFMY QSKGIHKNAK VAFCIHNIAY QGRFPFADFS LLNLPDDFRG AFDFIDGYDK 300 PVKGRKINWM KAGILESDRV LTVSPHYAKE LISGEEKGVE LDNIIRKTGI SGIVNGMDVQ 360 EWNPSTDRYI NVNYDATTVM NAKPLVKEAL QSQLGLPVDR NIPLIGFIGR LEEQKGSDIL 420 AQAIPKFMGG NVQIVVLGTG KKPMEQQIEQ LEIICPEKAR GITKFSTPLA HKIIAGADFM 480 LVPSRFEPCG LIQLHAMRYG TVPIVASTGG LFDTVKEGIT GFQMRSFHVE CDRVDLADVA 540 AIAKHVNRAV ATYGTPALKE MIQNCMALDL SWKEPARLWE KMLLSMEVAG SEPGIEGDEI 600 APLARENLAT P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 6.0e-83 | 181 | 582 | 414 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 3.0e-103 | 85 | 583 | 521 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 7.0e-127 | 85 | 582 | 518 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 7.0e-164 | 85 | 585 | 515 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-171 | 86 | 583 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACH72975.1 | 0 | 1 | 611 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACJ11735.1 | 0 | 1 | 611 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACJ11751.1 | 0 | 1 | 611 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACM78591.1 | 0 | 1 | 611 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACV72639.1 | 0 | 1 | 611 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 85 | 611 | 10 | 536 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3vue_A | 0 | 85 | 611 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 85 | 587 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 85 | 588 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 85 | 588 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ568414 | 616 | 1 | 612 | 0 |
HO629148 | 587 | 30 | 612 | 0 |
HO825853 | 518 | 93 | 610 | 0 |
HO778340 | 394 | 61 | 452 | 0 |
CN831271 | 382 | 231 | 612 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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