| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10019602m |
| Family | GH9 |
| Protein Properties | Length: 545 Molecular Weight: 61040.5 Isoelectric Point: 9.0778 |
| Chromosome | Chromosome/Scaffold: 3 Start: 46004400 End: 46007704 |
| Description | glycosyl hydrolase 9B13 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 80 | 535 | 0 |
| NYRDALTKSIIFFEGQRSGKLPPNQRMTWRRDSGLTDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELRNAREAIRWATDYLLK ATVHPDTIYVQVGDANKDHACWERPEDMDTPRTVIKIDRNYPGSDVAGETAAALAAASLVFRRSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKKFVCP FYCSYSGYQDELLWGAAWLHKATRNPTYLNYIQVNGQILGAAEYDNTFGWDNKHVGARILLSKAFLVQKLQSLHEYKDHADNFICSLIPGASFSSAQYTP GGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHRVVNCGGTTVTAKRLRTIAKRQVDYILGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSVGAHPARIQC SSGFSIMKSQSPNPNVLVGAIVGGPDQHDRFPDERPDYEQSEPSTYMNAPLVGALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 545 Download |
| MENMRYLSIT SSDSTNWLVG LLVWFLYSEE QPQSSKMALS LSLFTRLVLL CWFTTSLLLC 60 NGFPAAFHPH HHHPHFAKHN YRDALTKSII FFEGQRSGKL PPNQRMTWRR DSGLTDGAAM 120 HVDLVGGYYD AGDNVKFGFP MAFTTTMLSW SVIEFGGLMK GELRNAREAI RWATDYLLKA 180 TVHPDTIYVQ VGDANKDHAC WERPEDMDTP RTVIKIDRNY PGSDVAGETA AALAAASLVF 240 RRSDPTYSKL LVRRAIRVFQ FADKYRGAYS NGLKKFVCPF YCSYSGYQDE LLWGAAWLHK 300 ATRNPTYLNY IQVNGQILGA AEYDNTFGWD NKHVGARILL SKAFLVQKLQ SLHEYKDHAD 360 NFICSLIPGA SFSSAQYTPG GLLFKMSDSN MQYVTSTSFL LLTYAKYLTS AHRVVNCGGT 420 TVTAKRLRTI AKRQVDYILG DNPLKMSYMV GYGPRYPQRI HHRGSSLPSV GAHPARIQCS 480 SGFSIMKSQS PNPNVLVGAI VGGPDQHDRF PDERPDYEQS EPSTYMNAPL VGALAYLAHS 540 FGQL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 0 | 51 | 544 | 497 | + endoglucanase | ||
| PLN02308 | PLN02308 | 0 | 79 | 540 | 463 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 80 | 535 | 462 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 0 | 79 | 538 | 463 | + cellulase | ||
| PLN02613 | PLN02613 | 0 | 80 | 537 | 462 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA85150.1 | 0 | 70 | 544 | 32 | 506 | endo-1,4-beta-glucanase [Pisum sativum] |
| RefSeq | XP_002271736.1 | 0 | 51 | 544 | 23 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301487.1 | 0 | 37 | 544 | 1 | 511 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002320998.1 | 0 | 37 | 544 | 1 | 510 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523114.1 | 0 | 74 | 544 | 40 | 510 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 79 | 537 | 3 | 428 | A Chain A, Crystal Structure Of Irak-4 |
| PDB | 1ksc_A | 0 | 79 | 537 | 3 | 428 | A Chain A, Crystal Structure Of Irak-4 |
| PDB | 1ks8_A | 0 | 79 | 537 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 80 | 542 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 80 | 542 | 5 | 445 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY264797 | 387 | 20 | 406 | 0 |
| ES791832 | 318 | 228 | 545 | 0 |
| CO125126 | 297 | 108 | 404 | 0 |
| DY287815 | 369 | 18 | 381 | 0 |
| DY287815 | 73 | 314 | 385 | 0.057 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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