y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10019617m |
Family | GH14 |
Protein Properties | Length: 542 Molecular Weight: 60964.2 Isoelectric Point: 5.9726 |
Chromosome | Chromosome/Scaffold: 3 Start: 49043875 End: 49052386 |
Description | beta-amylase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 107 | 524 | 0 |
YVMLPLGVINLKCELIDPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHTPQDYNWNGYKKLFQMVSELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRINPHIFFTDREGRRNPECLSWGIDKERVLRGRTALEVYFDYMRSFRVEFDEFFQNGVISMVVVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLL KNLRKASEARGHSFWARGPDNAGSYNSRPHETGFFCDGGDYNGYYGRFFLNWYSQVLVDHGDRVLSLAKLAFEGTCIGAKLSGFHWWYKTASHAAELTAG FYNPCNRDGYAAIVATLKKNGAVLNFASAELHTLERQEEFSEALADPDGLMWQVMNAAWDVCTPVASENTLPCHDRVGYNKILDNAKPLSDPDGRHFLSF SYLRLGLGLMERENFMEF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MVTSSSSHMV SQQTPSTSLR GVSSGYRSSV EYNTCQMKGV FMPTPSPYDL SPIAQSQPSL 60 VEDGREQTEI QSHIGGPVDA VSDKQIADVP PKLPERDFSG TPYVPVYVML PLGVINLKCE 120 LIDPDGLLKQ LRVLKSINVD GVMVDCWWGI VEAHTPQDYN WNGYKKLFQM VSELKLKLQV 180 VMSFHECGGN VGDDVCIPLP HWVAEIGRIN PHIFFTDREG RRNPECLSWG IDKERVLRGR 240 TALEVYFDYM RSFRVEFDEF FQNGVISMVV VGLGPCGELR YPSCPVKHGW RYPGIGEFQC 300 YDQYLLKNLR KASEARGHSF WARGPDNAGS YNSRPHETGF FCDGGDYNGY YGRFFLNWYS 360 QVLVDHGDRV LSLAKLAFEG TCIGAKLSGF HWWYKTASHA AELTAGFYNP CNRDGYAAIV 420 ATLKKNGAVL NFASAELHTL ERQEEFSEAL ADPDGLMWQV MNAAWDVCTP VASENTLPCH 480 DRVGYNKILD NAKPLSDPDG RHFLSFSYLR LGLGLMEREN FMEFERFVKR MHGEAVLDLQ 540 V* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 3.0e-131 | 104 | 531 | 436 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-150 | 104 | 531 | 434 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-172 | 103 | 534 | 439 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 2 | 541 | 541 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 46 | 534 | 489 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAE99337.1 | 0 | 8 | 538 | 157 | 682 | putative beta-amylase [Arabidopsis thaliana] |
EMBL | CBI40368.1 | 0 | 8 | 541 | 123 | 657 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182112.2 | 0 | 8 | 538 | 157 | 682 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002273843.1 | 0 | 8 | 541 | 165 | 699 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511857.1 | 0 | 8 | 541 | 170 | 704 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wds_A | 0 | 103 | 534 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdr_A | 0 | 103 | 534 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1ukp_D | 0 | 103 | 534 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 103 | 534 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_B | 0 | 103 | 534 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX642630 | 237 | 203 | 439 | 0 |
JG638376 | 267 | 112 | 378 | 0 |
DT587209 | 255 | 120 | 374 | 0 |
DV021150 | 292 | 189 | 480 | 0 |
GO367915 | 286 | 115 | 400 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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