| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10019682m |
| Family | GT31 |
| Protein Properties | Length: 531 Molecular Weight: 59572.3 Isoelectric Point: 7.6618 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2504395 End: 2508834 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 450 | 520 | 1.1e-27 |
| ERMAVRKSWMQHKFVQSSNVVARFFVALHARKEVNVELKKEAEFFGDIVLVPYLDNYDLVVLKTVAICEYG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 531 Download |
| MRKLKLLSKS EKGGNFEMVV SLSRQRWIQI LIFIGVLYLI FLIGLQVPFV FTTGFSSISQ 60 EPVITQHYDR LRRIEEGHLQ VKAPSRPLKQ WVSSQDSDSP TQSQLTPTAW SNSKSQLLSN 120 ISLDAKTFTP GSESGVLQLH KAAKTAFEVG AKLWEELESG NIQIDTKKKE NLSESCPHSI 180 ILSGSEFLNN KNLMILPCGL TLGSHITIVG VPRAAHAEKN PKISFLNDGQ ETMVSQFMME 240 LRGLKTVEGE EPPRILHFNP RLKGDFSGKP VIEQNTCYRM QWGTALRCQG RPSRPDEETV 300 DGKLKCEKWI HDDENHPEQA KNKWWLLKRL GSDTEKGTTD WSSPFPFEER KLFVLTLRAG 360 LEGYHVSVDG KHVTSFPYRT GFTLEDATGL TVNGDVDVRD IFAASLPTTH PSSGPQTHLE 420 MSSRWQAPPL PEGPVELFIG ILSAGNHFAE RMAVRKSWMQ HKFVQSSNVV ARFFVALHAR 480 KEVNVELKKE AEFFGDIVLV PYLDNYDLVV LKTVAICEYG VSCQIIIIIS * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01762 | Galactosyl_T | 2.0e-8 | 449 | 523 | 77 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| smart00908 | Gal-bind_lectin | 2.0e-16 | 197 | 401 | 205 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 3.0e-17 | 196 | 398 | 203 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 8.0e-20 | 192 | 401 | 210 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 2.0e-68 | 155 | 521 | 374 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95149.1 | 0 | 40 | 521 | 1 | 480 | unknown [Populus trichocarpa] |
| DDBJ | BAA97209.1 | 0 | 1 | 522 | 1 | 519 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001119480.1 | 0 | 1 | 521 | 1 | 518 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_201068.1 | 0 | 1 | 521 | 1 | 518 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002511491.1 | 0 | 1 | 521 | 1 | 508 | galactosyltransferase, putative [Ricinus communis] |
