CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10020231m
FamilyGH18
Protein PropertiesLength: 433 Molecular Weight: 49145.3 Isoelectric Point: 9.3385
ChromosomeChromosome/Scaffold: 3 Start: 48290194 End: 48293463
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181064233.4e-33
  PVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLILEGRHNADAGWLLELRKGDALVLPRVVLEAFPKELLRKKKLRDKAIDLILTECKEMEY
  DGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPN
  APLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEASGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMR
  LEEAKLWGTGIAIWEIGQ
Full Sequence
Protein Sequence     Length: 433     Download
MAKRRDRRVA PSPGRPKNRV ESAARLDQFS DSASDRKLIT IFVIFFIVIP TVSVLLYCTK    60
YSTRANRSAT HMHQRGLVKT DVNYQEILTE NSKVSENASH RYYTYPVLAY ITPWNSKGYE    120
LAKMFNSKFT HLSPVWYDLK SQGTSLILEG RHNADAGWLL ELRKGDALVL PRVVLEAFPK    180
ELLRKKKLRD KAIDLILTEC KEMEYDGIVL ESWSTWTAYG ILHDPELRNM ALEFIKQLGN    240
ALHSVNSVRN RKQHLQLVYV IGPPHSEKFQ PHDFGPVDLQ SLSDAVDGFS LMTYDFSGPH    300
NPGPNAPLKW ISFTLQLLLG SPGIGTRSLA RKIFLGINFY GNDFVLSEAS GGGAITGREY    360
LNLLQKHKPA LQWEKNSGEH FFFFSDENQV KHAVFYPSLI SISMRLEEAK LWGTGIAIWE    420
IGQGLDYFFD LL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG3858COG38586.0e-16225432214+
cd02874GH18_CFLE_spore_hydrolase2.0e-20225432214+
smart00636Glyco_189.0e-22107423357+
cd02876GH18_SI-CLP2.0e-141103432336+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.1014321516hypothetical protein [Vitis vinifera]
EMBLCBI40499.1014321435unnamed protein product [Vitis vinifera]
RefSeqNP_192013.1014321430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.106043227399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.1014321432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A07243245393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B07243245393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.000003228421127308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.000003228421127308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Transmembrane Domains
StartEnd
3857
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY27458239313910
DY27271430953130
FC88105630313030
FC91674630153050
DY272714363093440.000003
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny