y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10020465m |
Family | GH14 |
Protein Properties | Length: 401 Molecular Weight: 44959.2 Isoelectric Point: 6.5031 |
Chromosome | Chromosome/Scaffold: 3 Start: 49043875 End: 49052386 |
Description | beta-amylase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 107 | 387 | 0 |
YVMLPLGVINLKCELIDPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHTPQDYNWNGYKKLFQMVSELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRINPHIFFTDREGRRNPECLSWGIDKERVLRGRTALEVYFDYMRSFRVEFDEFFQNGVISMVVVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLL KNLRKASEARGHSFWARGPDNAGSYNSRPHETGFFCDGGDYNGYYGRFFLNWYSQVLVDHGDRVLSLAKLAFEGTCIGAKV |
Full Sequence |
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Protein Sequence Length: 401 Download |
MVTSSSSHMV SQQTPSTSLR GVSSGYRSSV EYNTCQMKGV FMPTPSPYDL SPIAQSQPSL 60 VEDGREQTEI QSHIGGPVDA VSDKQIADVP PKLPERDFSG TPYVPVYVML PLGVINLKCE 120 LIDPDGLLKQ LRVLKSINVD GVMVDCWWGI VEAHTPQDYN WNGYKKLFQM VSELKLKLQV 180 VMSFHECGGN VGDDVCIPLP HWVAEIGRIN PHIFFTDREG RRNPECLSWG IDKERVLRGR 240 TALEVYFDYM RSFRVEFDEF FQNGVISMVV VGLGPCGELR YPSCPVKHGW RYPGIGEFQC 300 YDQYLLKNLR KASEARGHSF WARGPDNAGS YNSRPHETGF FCDGGDYNGY YGRFFLNWYS 360 QVLVDHGDRV LSLAKLAFEG TCIGAKVFTG GTRQLVMLLS * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 9.0e-99 | 104 | 391 | 291 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-116 | 104 | 387 | 286 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-125 | 103 | 387 | 288 | + beta-amylase | ||
PLN02705 | PLN02705 | 2.0e-170 | 46 | 387 | 342 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 2 | 387 | 387 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28536.1 | 0 | 8 | 387 | 157 | 531 | putative beta-amylase [Arabidopsis thaliana] |
EMBL | CBI40368.1 | 0 | 8 | 387 | 123 | 503 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182112.2 | 0 | 8 | 387 | 157 | 531 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002273843.1 | 0 | 8 | 387 | 165 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511857.1 | 0 | 8 | 387 | 170 | 550 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1q6f_A | 0 | 103 | 391 | 11 | 298 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1q6e_A | 0 | 103 | 391 | 11 | 298 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (E178y) With Increased Ph Optimum At Ph 5.4 |
PDB | 1q6g_A | 0 | 103 | 391 | 11 | 298 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1v3i_A | 0 | 103 | 391 | 11 | 298 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1wdp_A | 0 | 103 | 391 | 11 | 298 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG638376 | 267 | 112 | 378 | 0 |
DT587209 | 255 | 120 | 374 | 0 |
DT743760 | 240 | 112 | 351 | 0 |
EH764943 | 252 | 84 | 335 | 0 |
HO064443 | 239 | 92 | 330 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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