y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10020660m |
Family | GT90 |
Protein Properties | Length: 374 Molecular Weight: 44384.9 Isoelectric Point: 9.6462 |
Chromosome | Chromosome/Scaffold: 3 Start: 1935327 End: 1939320 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 152 | 362 | 0 |
RLPDLELMFDCDDRPVVLSRDYSGPNNKGPPPLFRYSGDRWTMDIVFPDWSFWGWAEININPWESLLRELKEGNNRRNWIDREPYAYWKGNPFVAETRRD LLTCNLSDKHDWNARLYVQDWILESKRGFQQSNLASQCAHRYKIYIEGYAWSVSEKYILACDSMTLLVKPYFHDFFIRYLQPLRHYWPIRDKDKCKSIKF AVDWGNTHKQK |
Full Sequence |
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Protein Sequence Length: 374 Download |
MIELFAFSII LQSNFSVHNI SRNKTVIIVS RKPQNRPPKR ITTPLNCVKN QTQTCPTNYP 60 KTSQTQKSIS DYSITPTSTC PDYFRWIHED LSPWKVTGIT RDMLERANQT AHFRLVLVNN 120 KVYIHKYKQS IQTRDVFTIW GILQLLRKYP GRLPDLELMF DCDDRPVVLS RDYSGPNNKG 180 PPPLFRYSGD RWTMDIVFPD WSFWGWAEIN INPWESLLRE LKEGNNRRNW IDREPYAYWK 240 GNPFVAETRR DLLTCNLSDK HDWNARLYVQ DWILESKRGF QQSNLASQCA HRYKIYIEGY 300 AWSVSEKYIL ACDSMTLLVK PYFHDFFIRY LQPLRHYWPI RDKDKCKSIK FAVDWGNTHK 360 QKVISFVDYI IPM* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00672 | CAP10 | 2.0e-100 | 152 | 362 | 217 | + Putative lipopolysaccharide-modifying enzyme. | ||
pfam05686 | Glyco_transf_90 | 5.0e-103 | 75 | 250 | 176 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN66409.1 | 0 | 49 | 353 | 23 | 320 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34690.1 | 0 | 15 | 363 | 39 | 378 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197774.1 | 0 | 22 | 363 | 89 | 422 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002510787.1 | 0 | 30 | 363 | 58 | 387 | KDEL motif-containing protein 1 precursor, putative [Ricinus communis] |
RefSeq | XP_002510788.1 | 0 | 1 | 363 | 45 | 409 | KDEL motif-containing protein 1 precursor, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY294649 | 268 | 13 | 280 | 0 |
DY289845 | 257 | 13 | 269 | 0 |
FC891280 | 225 | 13 | 237 | 0 |
FC892260 | 223 | 13 | 235 | 0 |
FC909433 | 206 | 1 | 206 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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