| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10023534m |
| Family | GH5 |
| Protein Properties | Length: 539 Molecular Weight: 60900.6 Isoelectric Point: 8.3549 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1366610 End: 1368717 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 33 | 346 | 5.29999e-41 |
| ASTGQRVKLACVNWPAHLQPMLAEGLDKKPLGEIVAAVVKMHFNCVRLTWSTFMFTRPNYGHISVSQTLDSLDLKEAKQGISKNNPFILNMTHIQAYEAV VGELGAQGIMVLLDNHISKPDWCCSNTDGNGFFGDRYFDPNEWMKGLSFVADRFKEKRQVVAISLRNELRGPRQNEPDWYKYISEGARVVHKRNPHVLVF VSGLNFDLDLRFLQKSPLALDLDNKLVYEIHWYSFSQDQNMWKTQPTNIVCYKVTQSFINRAVFLTTRKNPAPLVLSEFGFDQREVNLADNLYMTCLMAY AAETDLDWALWALQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 539 Download |
| MLEKSLQAIF LLSLVSFTYS FPLSTNKRWI INASTGQRVK LACVNWPAHL QPMLAEGLDK 60 KPLGEIVAAV VKMHFNCVRL TWSTFMFTRP NYGHISVSQT LDSLDLKEAK QGISKNNPFI 120 LNMTHIQAYE AVVGELGAQG IMVLLDNHIS KPDWCCSNTD GNGFFGDRYF DPNEWMKGLS 180 FVADRFKEKR QVVAISLRNE LRGPRQNEPD WYKYISEGAR VVHKRNPHVL VFVSGLNFDL 240 DLRFLQKSPL ALDLDNKLVY EIHWYSFSQD QNMWKTQPTN IVCYKVTQSF INRAVFLTTR 300 KNPAPLVLSE FGFDQREVNL ADNLYMTCLM AYAAETDLDW ALWALQGSYY LRGGLKGAEE 360 TFGALDSTWQ RPRNPNFLER LRFLQTKTHV PTTSRTRTSY IIFHPLSGNC VNANARNELY 420 ASNRGPFSRW SYGGDGTPIR LMDRSLCLKV VGDGLPPMLS NDCQSNQSAW SLVSSSKLHL 480 ATKDDEHGGE LLCLQVSPTN SSQVVTTKCI CVGDDSSCLQ NPQSQWFKLV LTNVLSLA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00458 | RICIN | 0.005 | 402 | 526 | 131 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| COG2730 | BglC | 3.0e-5 | 38 | 235 | 206 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 6.0e-11 | 59 | 345 | 297 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI34404.1 | 0 | 3 | 534 | 20 | 560 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272386.1 | 0 | 1 | 534 | 1 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272422.1 | 0 | 4 | 534 | 87 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272534.1 | 0 | 3 | 534 | 4 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509879.1 | 0 | 26 | 534 | 30 | 535 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00000000002 | 25 | 370 | 8 | 337 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000002 | 25 | 370 | 8 | 337 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00000000003 | 25 | 370 | 8 | 337 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000000003 | 25 | 370 | 8 | 337 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 3qho_C | 0.00003 | 29 | 238 | 49 | 256 | A Chain A, Crystal Analysis Of The Complex Structure, Y299f-Cellotetraose, Of Endocellulase From Pyrococcus Horikoshii |
