Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10023723m |
Family | CE8 |
Protein Properties | Length: 583 Molecular Weight: 64103 Isoelectric Point: 9.3042 |
Chromosome | Chromosome/Scaffold: 3 Start: 45988658 End: 45993348 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 270 | 565 | 0 |
LIVAKDGSGNFTTITEAVEAAPNKSNTRFVIYIKAGAYFENVEVDKKKTMLMFVGDGIGKTVVKANRSVVDGWTTFRSATVAVVGTGFIAKGITVENSAG PSKHQAVALRSGSDLSAFYKCSFVGYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAVVFQICNLYARKPNANQKNIITAQGREDPNQNTGISILNCKVAA ASDLIPYQTEFKTYLGRPWKEYSRTVFMLSYLGDLIAPAGWLEWNGTFALSTLFYGEYKNRGPGSNTSARVTWPGYRVINNSAVAAQFTAGPFLQG |
Full Sequence |
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Protein Sequence Length: 583 Download |
MGRAHGVGFP LPSHLDEVNA GVGGIHTPHS HSSNSAIFLL LFVLSAVSVT TLKKNPKTTD 60 APHLRVHKHF QVAHSACEGT LYPELCVSTL LSVPDLASKR VPELISVTIN RTLSELRASS 120 SNCSSIGQSY PNFNTLEKRA INDCLELFHD TIVELKSALN DLSPKKLPSK HYHDLQTLFS 180 GAMTNQYTCL DGFAYSDGNV RDVIKSSLYN ISRHVSNSLV MLKKIPGDNM SSKYEVFPEY 240 GRIKRGFPTW LSLNDRKLLQ KSVNLTKFDL IVAKDGSGNF TTITEAVEAA PNKSNTRFVI 300 YIKAGAYFEN VEVDKKKTML MFVGDGIGKT VVKANRSVVD GWTTFRSATV AVVGTGFIAK 360 GITVENSAGP SKHQAVALRS GSDLSAFYKC SFVGYQDTLY VHSLRQFYRE CDVYGTVDFI 420 FGNAAVVFQI CNLYARKPNA NQKNIITAQG REDPNQNTGI SILNCKVAAA SDLIPYQTEF 480 KTYLGRPWKE YSRTVFMLSY LGDLIAPAGW LEWNGTFALS TLFYGEYKNR GPGSNTSARV 540 TWPGYRVINN SAVAAQFTAG PFLQGSEWLN STGIPFYLNL TP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02933 | PLN02933 | 0 | 98 | 580 | 492 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 269 | 566 | 298 | + Pectinesterase. | ||
PLN02484 | PLN02484 | 0 | 59 | 581 | 530 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 75 | 576 | 537 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 72 | 580 | 529 | + Pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 64 | 580 | 46 | 564 | pectin methylesterase [Musa acuminata AAA Group] |
EMBL | CBI36883.1 | 0 | 38 | 554 | 32 | 498 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271665.1 | 0 | 29 | 581 | 2 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 136 | 580 | 6 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 58 | 581 | 34 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 269 | 580 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 271 | 576 | 6 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-23 | 266 | 488 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-23 | 266 | 488 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-23 | 266 | 488 | 2 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 477 | 105 | 581 | 0 |
DY285162 | 296 | 92 | 387 | 0 |
FC895957 | 290 | 92 | 381 | 0 |
ES850416 | 340 | 238 | 576 | 0 |
DY285162 | 34 | 394 | 427 | 0.000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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