Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10024186m |
Family | GT48 |
Protein Properties | Length: 1955 Molecular Weight: 226560 Isoelectric Point: 8.8946 |
Chromosome | Chromosome/Scaffold: 3 Start: 29963168 End: 29978842 |
Description | glucan synthase-like 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1082 | 1815 | 0 |
IPANLEARRRISFFATSLFMGMPSAPKVRNMLSFSVLTPHFTEDINFSMKELYSSKEEVSIIFYMQKIYPDEWKNFLERMGCENLDTLKDEGKEEELRSW ASFRGQTLSRSVRGMMYYEEALKLQAFLDMAEDEDILEGYEAAERNNRTLFAQLDALSDMKFTYVVSCQMFGSQKASGDPRAQDMIDLMIRYPSLRVAYV EEKEVFDANKPRKVYSSILVKGVNGKDPGAEEIYRIKLPGPPNIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLQEFLQNHGRRPPTIL GLREHIFTGSVSSLAWFMSYQETSFVTIGQRLLANPLRVRFHYGHPDVFDRVFHITRGGISKASKTINLSEDVFAGFNCTLRRGCITYHEYIQVGKGRDV GLNQISKFEAKVANGNSEQTLSRDIHRLGRRFDFFRMLSCYFTTIGFYFSSMISVIGIYVFLYGQLYLVLSGLQKALMIEAKMRNIQSLEAALASQSFIQ LGLLTGLPMVMEIGLEKGFLNALKDFVLMQLQLAALFFTFSLGSKTHYYGRTILHGGAKYRPTGRKVVVFHASFTENYRLYSRSHFVKGFELLLLLIVYD LFRRSYQSNMAYVFITYSIWFMSITWLFAPFLFNPSGFSWGKIVDDWKDWNKWIRVQGGIGIPQDKSWHSWWIDEQAHLHRSGLGARLFEILLSLRFFIY QYGLVYHLDISQQSKNFLVYVLSWIVILAVFLTV |
Full Sequence |
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Protein Sequence Length: 1955 Download |
MSHEIVPADS ILDQETDGSS SSNHTYERFY DASSSGAYDY EANAENEETP YTFTRTRSLT 60 YGRQHVPESF DSERLPAFLA SGIHKFLLVA NLLESEEPRV AYLCRFQAFE IAHRMDRNST 120 ARGVRQFKTS LLQRLEQDEY TTLDRRKEET DTRELRRVYH AYKDYIFRNS GALNLEGSER 180 ERLINARRIA SVLYEVLKTV TNAVDPQALA DRDSIPNKPQ FYVPYNILPL DQGGIQQPIM 240 QLPEIKAAIA AVHNTRGLPS APDFQKSGAF MDLFDFLHYC FGFQEGNVAN QRENLILLLA 300 NIHIRQSHKQ SPISELGDAA VDELMRKFFK NYTNWSKFLG RRKSIRLPCV KQEAQQHKIL 360 YLGLYLLIWG EAANLRFMPE CLCYIFHHMA YELHGILTGA VSTITGEKIM PAYGGAFESF 420 LKNVVTPIYR VMYEEAQKSK NGTADHSKWR NYDDLNEFFW SPVCFEIGWP MRLEHDFFWV 480 TNNRKAKNAT AGVEENCEPM WLGKTNFVEI RSFWQIFRSF DRMWSFYILC LQAMIIMACH 540 DLESPLQVFD ADVFEDIMSI FITSTILKLI QAIFDIAFTW KARRTMESSR KRKYMFKLFV 600 AVIWTIVLPV LYASTRRNYT CYSTHYKSWL GELCFSSYMV AVTIYLMTNA IELVLFFVPT 660 IGKYIEISNW RICTMLSWWT QPRLYVGRGM QETQVSQFKY TVFWFLVLLS KFSFSYIFEI 720 RPLIEPTRLI MKIGVQRYDW HELFPKVKSN AGAIVAVWSP IIVVYFMDTQ IWYSVFCTIF 780 GGLYGILHHL GEIRTLGMLR SRFHTLPSAF NVCLIPPALR NDQKNKRIFF RRFHKGKKDD 840 IAKFVLVWNQ IVNRFRVEDL ISNRELDLMT IPMSKELFSG IVRWPIFLLA HKFVTALSIA 900 RDFVGKDKIL FRKIRKDKYM YSAVKECYES LKCILEILVV GDLEKRVISN IVNEIEESIG 960 RSNLLDNFKM GELLALQAKC IELVELLVEG NETHHDKVVK VLQDIFELVT NDMMTNGSRV 1020 LDSLNSSQLV ERDFAFCLQR TRHQLFADKN SIHFPLPDND SLNEQIKRFL LLLSVKDKAM 1080 DIPANLEARR RISFFATSLF MGMPSAPKVR NMLSFSVLTP HFTEDINFSM KELYSSKEEV 1140 SIIFYMQKIY PDEWKNFLER MGCENLDTLK DEGKEEELRS WASFRGQTLS RSVRGMMYYE 1200 EALKLQAFLD MAEDEDILEG YEAAERNNRT LFAQLDALSD MKFTYVVSCQ MFGSQKASGD 1260 PRAQDMIDLM IRYPSLRVAY VEEKEVFDAN KPRKVYSSIL VKGVNGKDPG AEEIYRIKLP 1320 GPPNIGEGKP ENQNHAIIFT RGEALQTIDM NQDNYLEEAL KMRNLLQEFL QNHGRRPPTI 1380 LGLREHIFTG SVSSLAWFMS YQETSFVTIG QRLLANPLRV RFHYGHPDVF DRVFHITRGG 1440 ISKASKTINL SEDVFAGFNC TLRRGCITYH EYIQVGKGRD VGLNQISKFE AKVANGNSEQ 1500 TLSRDIHRLG RRFDFFRMLS CYFTTIGFYF SSMISVIGIY VFLYGQLYLV LSGLQKALMI 1560 EAKMRNIQSL EAALASQSFI QLGLLTGLPM VMEIGLEKGF LNALKDFVLM QLQLAALFFT 1620 FSLGSKTHYY GRTILHGGAK YRPTGRKVVV FHASFTENYR LYSRSHFVKG FELLLLLIVY 1680 DLFRRSYQSN MAYVFITYSI WFMSITWLFA PFLFNPSGFS WGKIVDDWKD WNKWIRVQGG 1740 IGIPQDKSWH SWWIDEQAHL HRSGLGARLF EILLSLRFFI YQYGLVYHLD ISQQSKNFLV 1800 YVLSWIVILA VFLTVKAVNM GRQQFSVNYH LVFRFIKAFL FLGILSTIIS LSVICQLSFK 1860 DIIVCCLAFL PTGWGLILIA QAVRPKIENT GLWDFVKVLA KAYDYGMGVV LFTPIAVLAW 1920 LPIISAFQTR FLFNEAFNRH LQIQPILAGK KKHR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 0.003 | 81 | 138 | 58 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 3.0e-46 | 371 | 472 | 103 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1082 | 1832 | 839 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02389.1 | 0 | 1 | 1954 | 1 | 1972 | glucan synthase-like protein [Arabidopsis thaliana] |
RefSeq | NP_188075.1 | 0 | 1 | 1954 | 1 | 1973 | ATGSL04 (glucan synthase-like 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q9LUD7 | 0 | 1 | 1954 | 1 | 1976 | CALS8_ARATH RecName: Full=Putative callose synthase 8; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 4 |
RefSeq | XP_002317363.1 | 0 | 67 | 1954 | 39 | 1961 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530134.1 | 0 | 66 | 1952 | 39 | 1885 | transferase, transferring glycosyl groups, putative [Ricinus communis] |