Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10024391m |
Family | CE8 |
Protein Properties | Length: 567 Molecular Weight: 62620.1 Isoelectric Point: 8.9457 |
Chromosome | Chromosome/Scaffold: 3 Start: 45941780 End: 45943616 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 252 | 547 | 0 |
VTVSQDGRGMFSTINDAINAAPNDTDVSNGYFLIYIKDGVYQEYVSIAKNKINLMMIGDGINQTIITGNRSAVDGWTTFNSATFAVVAPNFVAVDITFRN TAGPSKFQAVALRSGGDLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTIDFILGNAAVVLQNCNIHARLPMIGQYNVITAQGRTDPNQNTGISIHNCT FRAADELASSNRTLPTYLGRPWKEYSRTVVMQSFLDGLINPAGWQIWTGDFALSTLYYAEYDNRGPGSNTANRVTWPGYHAINATDAANFTVSNFL |
Full Sequence |
---|
Protein Sequence Length: 567 Download |
MGSNLLLLIT LPILISIPFF SNPTCAANFA RKSRVTPETI CKYTPNQSYC KSMLANAKQT 60 TDIYTYGRFS FRKAFSQSRK FLDLIDNYLK RPSTLSTAAI RALEDCYLLA DLNMDYFSRS 120 FQTVNNTSQI LPAKQADDVQ TRLSAILTNQ QTCLDGLQAA VSAWSTANGL SVPLLDDTKL 180 SSVLLALFKK GWVGQKRKGT IWQMPTGTQR LFGKDGRLPL IMSDENRAIY EKVCKRKLNS 240 GDGRGVLVSK IVTVSQDGRG MFSTINDAIN AAPNDTDVSN GYFLIYIKDG VYQEYVSIAK 300 NKINLMMIGD GINQTIITGN RSAVDGWTTF NSATFAVVAP NFVAVDITFR NTAGPSKFQA 360 VALRSGGDLS TFYSCSFEGY QDTLYTHSLR QFYRECDIYG TIDFILGNAA VVLQNCNIHA 420 RLPMIGQYNV ITAQGRTDPN QNTGISIHNC TFRAADELAS SNRTLPTYLG RPWKEYSRTV 480 VMQSFLDGLI NPAGWQIWTG DFALSTLYYA EYDNRGPGSN TANRVTWPGY HAINATDAAN 540 FTVSNFLLGD QWLPRTGVPY TGGLIS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02416 | PLN02416 | 5.0e-152 | 18 | 564 | 570 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-152 | 102 | 564 | 464 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 18 | 566 | 552 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 36 | 565 | 554 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 252 | 550 | 300 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563662.1 | 0 | 13 | 566 | 7 | 579 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002268492.1 | 0 | 38 | 564 | 33 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 1 | 565 | 1 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 35 | 565 | 34 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 18 | 565 | 22 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 254 | 564 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 252 | 564 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 4e-23 | 262 | 421 | 44 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-21 | 255 | 515 | 12 | 300 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-21 | 255 | 515 | 12 | 300 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |