Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10024598m |
Family | CE8 |
Protein Properties | Length: 389 Molecular Weight: 42755 Isoelectric Point: 6.9049 |
Chromosome | Chromosome/Scaffold: 3 Start: 49886609 End: 49890517 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 146 | 373 | 0 |
RSMNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIY GTIDFIVGDAAAVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPAADLAATDLDGIIHPEGWIEWDGNFALSTLYYAEYLNAGLGAATA NRVKWPGFHVLNNPQQAAPFTVTGFIQG |
Full Sequence |
---|
Protein Sequence Length: 389 Download |
MSSFITTKMS ISLPTFLHLL LLAMALTTTS CTDQLAAVQS VRAAALQARN WARASIAPNG 60 LDESRLASLL HLASDNYTTD DARTWLSSSL ACRRTCLEGL EEKGRAQTHA RAHNLTVLLG 120 ESLNLHARGR GFRKGRFSWH SQNNQRSMNN TMFVGDGIDR TIVTGHRNVP DGSTTSSPAT 180 FGVSGDGFWA RDMTFENTAG PQKHEAVALR VSSDLSMFYR CSFKDYQDTL FTLSLRQFYR 240 DCQIYGTIDF IVGDAAAVFQ NFDIFVRRPM HDQSNMVTAQ GRDNPNENTG ISIEGSRIRP 300 AADLAATDLD GIIHPEGWIE WDGNFALSTL YYAEYLNAGL GAATANRVKW PGFHVLNNPQ 360 QAAPFTVTGF IQGDSWIPAT GVPFWLGI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 4.0e-16 | 63 | 134 | 72 | + pectinesterase family protein | ||
PLN02713 | PLN02713 | 5.0e-114 | 152 | 388 | 260 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-132 | 146 | 374 | 252 | + Pectinesterase. | ||
PLN02916 | PLN02916 | 7.0e-150 | 146 | 388 | 266 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_191632.2 | 0.000001 | 1 | 137 | 1 | 153 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_191632.2 | 0 | 146 | 388 | 254 | 519 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q84R10 | 0 | 146 | 388 | 254 | 519 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
RefSeq | XP_002511680.1 | 0.00000000000003 | 24 | 130 | 1 | 127 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002511680.1 | 0 | 148 | 388 | 209 | 472 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 146 | 388 | 54 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 133 | 388 | 38 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000003 | 171 | 315 | 79 | 244 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000003 | 171 | 315 | 79 | 244 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000000003 | 171 | 315 | 79 | 244 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |