| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10024881m |
| Family | GH35 |
| Protein Properties | Length: 855 Molecular Weight: 95374.4 Isoelectric Point: 7.5015 |
| Chromosome | Chromosome/Scaffold: 7 Start: 1613690 End: 1620021 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 35 | 338 | 0 |
| LLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIKKAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYGAQSKQLGAAGHNYMTWAAKMAVEMGTGVPWVMCKEEDAPDPVINSCNG FYCDAFTPNQPYKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAARFIQKGGSFINYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLK ELHR | |||
| Full Sequence |
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| Protein Sequence Length: 855 Download |
| MAALFVYRML IVFCLSLCLC CHHIHCSVTY DRKALLINGQ RRILFSGSIH YPRSTPDMWE 60 DLIQKAKDGG LDVIETYVFW NVHEPSPGNY NFEGRYDLVR FIKTIKKAGL YAHLRIGPYV 120 CAEWNFGGFP VWLKYVPGIS FRTDNEPFKR AMQGFTEKIV NLMKSENLFE SQGGPIILSQ 180 IENEYGAQSK QLGAAGHNYM TWAAKMAVEM GTGVPWVMCK EEDAPDPVIN SCNGFYCDAF 240 TPNQPYKPTI WTEAWSGWFT EFGGPIHQRP VQDLAFAAAR FIQKGGSFIN YYMYHGGTNF 300 GRSAGGPFIT TSYDYDAPID EYGLIRQPKY GHLKELHRAI KMCERALVSA DPIVTSLGGF 360 QQAHVYSSES GDCAAFLSNY DTKSAARVLF NNMHYNLPPW SISVLPDCRN VVFNTAKVGV 420 QTSQMEMLPA NAEMFSWESY FEDISSLDDS STFTTQGLLE QINVTRDASD YLWYITSVDI 480 GSSESFLHGG ELPTLIVQST GHALHIFING QLSGSAFGTR EARKFMYTGK VNLRAGRNKI 540 ALLSVAVGLP NVGGHYETWN TGILGPVALH GLDQGKWDLS WQKWTYQVGL RGEAMNLVSP 600 NGISSVEWMQ ASLAVQRQQP LMWHKAYFNA PEGDEPLALD MEGMGKGQIW INGQSVGRYW 660 TAYAKGDCNG CNYVGGYRPT KCQLGCGQPT QRWYHVPRSW LKPTQNFLVV FEELGGNPSR 720 ISLVKRSVTS VCAEVAEYHP TIKNWHIESY GKPEEFHSPK VHLRCSPGHT ISSIKFASFG 780 TPLGTCGSYQ QGPCHSPTSY DILEKKCVGK QRCAVTISNS NFGVDPCPNV LKRLSVEAIC 840 SPTTSTTMQP NWRG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 7.0e-5 | 50 | 133 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-22 | 28 | 330 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 6.0e-27 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-165 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 841 | 815 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAW47739.1 | 0 | 13 | 854 | 9 | 853 | beta-galactosidase [Prunus persica] |
| DDBJ | BAD91082.1 | 0 | 24 | 854 | 24 | 854 | beta-D-galactosidase [Pyrus pyrifolia] |
| EMBL | CAB16852.1 | 0 | 8 | 853 | 9 | 852 | beta-galactosidase like protein [Arabidopsis thaliana] |
| RefSeq | XP_002274449.1 | 0 | 1 | 845 | 1 | 845 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310279.1 | 0 | 11 | 854 | 12 | 847 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 32 | 336 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 9.99995e-41 | 28 | 410 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 9.99995e-41 | 28 | 410 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
