Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10024886m |
Family | GH35 |
Protein Properties | Length: 847 Molecular Weight: 93755.2 Isoelectric Point: 8.4365 |
Chromosome | Chromosome/Scaffold: 7 Start: 6510942 End: 6517380 |
Description | beta galactosidase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 41 | 343 | 0 |
AINGKRRILISGSIHYPRSSPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVKQAGLYVNLRIGPYVCAEWNFGGFPVWLKY IPGINFRTNNGPFKAEMHKFTKKIVDMMKAERLFESQGGPIILSQIENEYGPMEYEIGAPGRSYTRWAAKMAVGLDTGVPWIMCKQDDAPDPLINTCNGF YCDYFSPNKAYKPKMWTEAWTGWYTEFGGPVPHRPVEDLAFSVAKFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR |
Full Sequence |
---|
Protein Sequence Length: 847 Download |
MGMNKQLGMC NVLFILLLGC SGLFAPVEVE GSVSYDSKAI AINGKRRILI SGSIHYPRSS 60 PEMWPDLIQK AKDGGLDVIQ TYVFWNGHEP SPGKYYFEGN YDLVKFIKLV KQAGLYVNLR 120 IGPYVCAEWN FGGFPVWLKY IPGINFRTNN GPFKAEMHKF TKKIVDMMKA ERLFESQGGP 180 IILSQIENEY GPMEYEIGAP GRSYTRWAAK MAVGLDTGVP WIMCKQDDAP DPLINTCNGF 240 YCDYFSPNKA YKPKMWTEAW TGWYTEFGGP VPHRPVEDLA FSVAKFIQKG GSFINYYMYH 300 GGTNFGRTAG GPFIATSYDY DAPLDEYGLL RQPKWGHLKD LHRAIKLCEP ALVSGNPTVM 360 PLGNYQEAHV FKSKSACAAF LANYNQRTFA KVAFGNQHYN LPPWSISILP DCKNTVYNTA 420 RVGHQSTQMK MTPVPIHGGF SWQAFNEVPS AYGDSSFTMS GLLEQINTTR DATDYLWYMT 480 DVKIDPSEGF LRSGNYPVLT VMSAGHALHV FVNGQLAAGT AYGSLEFPKL TFTEGVNMRA 540 GINKIALLSI AVGLPNVGPH FETWNAGVLG PVTLNGLNEG RRDLSWQKWT YKVGLEGEKL 600 NLHSLSGGSS VEWAEGSLVA QRQPLTWYRT TFSAPAGNAP LALDMGSMGK GQVWVNGQSI 660 GRHWPAYKAS GSCGYCSYTG TYTEKKCLSN CGEASQRWYH VPRSWLKPTG NLLVVFEEWG 720 GNPNGISLVR REIDSVCAYM YEWQPTLINW QLHASGKVNK PLRPKAHLMC GPGQKIKSIK 780 FASFGTPEGV CGSYRQGSCH AFHSYDAFQR LCVGQNMCTV TVAPEMFGGD PCPSIMKQLA 840 VEAICG* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam02449 | Glyco_hydro_42 | 2.0e-7 | 55 | 191 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
pfam02140 | Gal_Lectin | 2.0e-19 | 770 | 845 | 80 | + Galactose binding lectin domain. |
COG1874 | LacA | 1.0e-24 | 33 | 335 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
pfam01301 | Glyco_hydro_35 | 4.0e-162 | 42 | 345 | 319 | + Glycosyl hydrolases family 35. |
PLN03059 | PLN03059 | 0 | 11 | 845 | 838 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 29 | 845 | 29 | 845 | unknown [Populus trichocarpa x Populus deltoides] |
EMBL | CAC44500.1 | 0 | 27 | 845 | 24 | 842 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | NP_187988.1 | 0 | 31 | 845 | 32 | 846 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002327432.1 | 0 | 29 | 845 | 22 | 838 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 11 | 845 | 13 | 844 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 30 | 341 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.005 | 493 | 664 | 394 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3.9937e-43 | 32 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3.9937e-43 | 32 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |