| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10025230m |
| Family | GH47 |
| Protein Properties | Length: 589 Molecular Weight: 66559.4 Isoelectric Point: 7.2792 |
| Chromosome | Chromosome/Scaffold: 7 Start: 16089143 End: 16100419 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH47 | 120 | 551 | 0 |
| AMIHAWSSYEKYAWGQDELQPQTKNGVNSFGGLGATLIDALDTLYIMGLDEQFQRAREWIANSLDFNKSYDASVFETTIRVVGGLLSAYDLSGDKVFLEK ARDIADRLLPAWNTRTGIPYNVINLAHGNPHNPSWTGGESILADSGTEQLELIALSQRTGDPKYRQRAEKVIVELNKTFPADGLLPIYISPDRGTPSYST ITFGAMGDSFYEYLLKVWIQGNKTSAVKPYRDMWETSMKGLLSLVRRSTPSSFTYICEKNGDSLIDKMDELACFAPGMIALGSSGYGPGDSEKFLSLAEE LAWTCYNFYQSTPTKLAGENYFFRDGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYKEWGWNIFQAFEKNSRIESGYVGLKDVNTGDKDNMMQSFFLA ETLKYLYLLFSPTTVISLDEWVFNTEAHPLKI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 589 Download |
| MARNRSSSSS LSSSSGKLRY CNPAYYLKRP KRLAMLLIVF VSVTLVVWDR QTLVREHEVE 60 LSKLNEEATQ LRNLLEEIKN NPANVIGKID HIKQAKQPPG NKAFAEDPID IQRKQKVKDA 120 MIHAWSSYEK YAWGQDELQP QTKNGVNSFG GLGATLIDAL DTLYIMGLDE QFQRAREWIA 180 NSLDFNKSYD ASVFETTIRV VGGLLSAYDL SGDKVFLEKA RDIADRLLPA WNTRTGIPYN 240 VINLAHGNPH NPSWTGGESI LADSGTEQLE LIALSQRTGD PKYRQRAEKV IVELNKTFPA 300 DGLLPIYISP DRGTPSYSTI TFGAMGDSFY EYLLKVWIQG NKTSAVKPYR DMWETSMKGL 360 LSLVRRSTPS SFTYICEKNG DSLIDKMDEL ACFAPGMIAL GSSGYGPGDS EKFLSLAEEL 420 AWTCYNFYQS TPTKLAGENY FFRDGQDMSV GTSWNILRPE TVESLFYLWR LTGNKTYKEW 480 GWNIFQAFEK NSRIESGYVG LKDVNTGDKD NMMQSFFLAE TLKYLYLLFS PTTVISLDEW 540 VFNTEAHPLK IVTQRDGEIS GRSDGHHRPN IRLRGRKGGR FIDDIRIH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1331 | COG1331 | 0.0004 | 199 | 291 | 93 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
| pfam01532 | Glyco_hydro_47 | 0 | 120 | 551 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 54 | 551 | 518 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16414.1 | 0 | 17 | 580 | 14 | 576 | AF126550_1 mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max] |
| EMBL | CBI18472.1 | 0 | 1 | 584 | 1 | 575 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175570.1 | 0 | 1 | 583 | 1 | 559 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_566675.1 | 0 | 1 | 580 | 1 | 568 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002310939.1 | 0 | 17 | 538 | 12 | 524 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 112 | 562 | 19 | 476 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fmi_A | 0 | 105 | 553 | 1 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 105 | 553 | 1 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 105 | 553 | 1 | 458 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1x9d_A | 0 | 108 | 553 | 82 | 536 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO780776 | 517 | 25 | 518 | 0 |
| CU615093 | 325 | 260 | 584 | 0 |
| DY974119 | 307 | 181 | 487 | 0 |
| EX117709 | 296 | 138 | 432 | 0 |
| HO780776 | 72 | 509 | 580 | 7e-21 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
