Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10025232m |
Family | CE8 |
Protein Properties | Length: 589 Molecular Weight: 64779.5 Isoelectric Point: 8.7852 |
Chromosome | Chromosome/Scaffold: 7 Start: 7898245 End: 7901186 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 281 | 573 | 0 |
ATVAQDGSGDYDTIKAAVAAVRKKSPTRFVIYVKKGTYRENVILDKSRWNVMMYGDGKTMTIVSGSLNFVDGTPTFATATVAVAGRGFIAKDMTFINTAG PEKHQAVAFRSGSDRSVFYRCSFNAYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNILPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTLSR FDDKLTAATYLGRPWKEFSTTVIMQSTIGPFLNALGWKEWVSGVDPPTSIFYAEYQNVGLGSPTSGRVKWAGYRPTLTTDEAAKFTVGNFIQG |
Full Sequence |
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Protein Sequence Length: 589 Download |
METIRSFKGY GKVDELEQQA FRRKTRKRVI ILIISSIVLV AVIIGAVIGV VVHKNKNDSS 60 SDNMPATQLT PAASLKAVCS VTRYPDSCFS SISSIDASNV TKDPEILFKL SLQVAMNELG 120 KLQNYPSKLK QQTKDPQVIE ALKVCETLFD DALDHVNESL SSMQVGSGEK LLSSKKIQDL 180 KTWLSTSITD QDTCLDALQE LNVSHYQNSN ILKDIRSAMQ NSSEFASNSL AIGSKVLGLL 240 GKVDIPVHRR LLSDHSDSGF PNWVGAGDRR LLQEANPKPD ATVAQDGSGD YDTIKAAVAA 300 VRKKSPTRFV IYVKKGTYRE NVILDKSRWN VMMYGDGKTM TIVSGSLNFV DGTPTFATAT 360 VAVAGRGFIA KDMTFINTAG PEKHQAVAFR SGSDRSVFYR CSFNAYQDTL YAHSNRQFYR 420 DCDITGTIDF IFGNAAVVFQ NCNILPRQPL PNQFNTITAQ GKKDPNQNTG ISIQKCTLSR 480 FDDKLTAATY LGRPWKEFST TVIMQSTIGP FLNALGWKEW VSGVDPPTSI FYAEYQNVGL 540 GSPTSGRVKW AGYRPTLTTD EAAKFTVGNF IQGSEWLAEA NVQYQESL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 4.0e-148 | 75 | 577 | 521 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-149 | 132 | 588 | 463 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-180 | 280 | 574 | 299 | + Pectinesterase. | ||
PLN02314 | PLN02314 | 0 | 1 | 588 | 590 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 588 | 590 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175787.1 | 0 | 1 | 587 | 1 | 586 | ATPME1; pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 1 | 588 | 1 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 1 | 588 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 588 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 588 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 279 | 577 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 280 | 588 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-20 | 291 | 566 | 18 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-20 | 291 | 566 | 18 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-20 | 291 | 566 | 18 | 329 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |