| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10025271m |
| Family | CE8 |
| Protein Properties | Length: 571 Molecular Weight: 62582.5 Isoelectric Point: 8.5673 |
| Chromosome | Chromosome/Scaffold: 7 Start: 16549516 End: 16552404 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 259 | 562 | 0 |
| DVTVCKDGSCKYKTVQDAVNAAPDNVPTKRFVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQN TAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFQDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFVF QNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQN FIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 571 Download |
| MAKSSSSSHS LLHKKPTKSS LLTLFSMASA LLISLLSLSL LFSLSSSTSR RHHTPLQQQQ 60 QPPVPQIQLA CKATRFPDVC QQSLSQSHNV PPNPSPAQMI QSAIGVSSQN LETAKSMVKR 120 ILDSSSDSQN RSRAATTCLQ ILGYSGARSQ SASDALPRGK LKDARAWYSA ALTYQYDCWS 180 ALKYVNDTKQ VGETMAFLDS LTGLTSNALS MMMSFDNFGE DFNAWRAPQT ERAGFWEKGG 240 SGAAQFGFRG GFPSKLTADV TVCKDGSCKY KTVQDAVNAA PDNVPTKRFV INIKAGVYEE 300 TVRVPFEKKN VVFLGDGMGK TVITGSLNVG QQGVSTYESA TVGVLGDGFM ASGLTIQNTA 360 GPDAHQAVAF RSDSDLSIIE NCEFLGNQDT LYAHSLRQFY KKCRIQGNVD FIFGNSPSIF 420 QDCEILVAPR QLKPEKGENN AVTAHGRTDP AQWSGFVFQN CLINGTEEYM KLYYSKPRVH 480 KNYLGRPWKE YSRTVFIHCN LEALVHPDGW LPWSGDFALK TLYYGEFQNT GPGSKTANRV 540 PWSSQIPAEH VNAYSVQNFI QGDEWISTSS * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 1.0e-116 | 71 | 569 | 519 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 3.0e-118 | 71 | 570 | 522 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-120 | 70 | 569 | 548 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-164 | 259 | 563 | 308 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 69 | 570 | 505 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB09534.1 | 0 | 66 | 570 | 70 | 577 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196538.1 | 0 | 66 | 570 | 44 | 551 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002281640.1 | 0 | 49 | 570 | 26 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309906.1 | 0 | 53 | 570 | 31 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 46 | 570 | 19 | 552 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 254 | 570 | 3 | 312 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 256 | 569 | 1 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 7e-17 | 270 | 515 | 18 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 7e-17 | 270 | 515 | 18 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 7e-17 | 270 | 515 | 18 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
