| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10025463m |
| Family | GH5 |
| Protein Properties | Length: 493 Molecular Weight: 55559.7 Isoelectric Point: 5.0328 |
| Chromosome | Chromosome/Scaffold: 7 Start: 5412237 End: 5416674 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 164 | 461 | 0 |
| QLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSSATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGSHNIVVDLHY YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MDIVFSKWVF AFSLSCCLIF SIAPSVEGLH GNSKVRGVNL GGWLVIEGWI KPSLFDGILN 60 GDMLLWRVSE SEFQFRTSQG QFLTCDGEGC VVSATEKSPS TPETFEIERN NDSRVHIKLK 120 SGTYLQATLG NQLTADYPGM PGWDDNAATF EMAIVANNLH GDYQLANGYG HERAKEVLKR 180 HRNTFITIED FNFLYRHGIN TVRIPVGWWI AFDPDPPAPF IGGSLEALDN ALSWAEAYNI 240 KCIIDLHAAP GSQNGMEHSA SRDGTTDWPA SDYISQTLDV IDFLASRYAK HPALLGIELL 300 NEPSSATVPL DILVPYYKQG YQIVRKYSPT AYVIVCQRIG NADPLELYQA NIGSHNIVVD 360 LHYYNLFDTF FVNMSTVDNI LFIYKSREAQ LQALNNANGP LVFIGEWVNE WNVTSGTQKD 420 YQDFGSAQLE VYNAASFGWA YWTLKNDRKH WDFEWNIRNN YLQLGNSPNM QIFNSLVLLG 480 KIFAWLYLHH IL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 3.0e-5 | 75 | 141 | 67 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 8.0e-6 | 74 | 136 | 63 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 1.0e-22 | 183 | 447 | 269 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 9.0e-24 | 158 | 463 | 341 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33153.1 | 0 | 1 | 492 | 60 | 592 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262875.1 | 0 | 1 | 492 | 48 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310872.1 | 0 | 35 | 465 | 1 | 474 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 9 | 479 | 11 | 526 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 17 | 492 | 4 | 515 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 1e-29 | 162 | 380 | 45 | 265 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqp_A | 0.008 | 32 | 62 | 6 | 36 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3n9k_A | 1e-29 | 162 | 380 | 50 | 270 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 3n9k_A | 0.009 | 32 | 62 | 11 | 41 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 2pc8_A | 2e-29 | 162 | 380 | 51 | 271 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
