CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10025561m
FamilyGH43
Protein PropertiesLength: 464 Molecular Weight: 53028.3 Isoelectric Point: 7.1003
ChromosomeChromosome/Scaffold: 7 Start: 4245730 End: 4250148
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431603814.2e-32
  TYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISD
  YPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVHA
  AESIMGPWEAMGNPCIGGNKVF
Full Sequence
Protein Sequence     Length: 464     Download
MSGNYVQLMF RVLSGSKCSV SIILWILAGF LLLLHFFSLV SHKDGTSGEI ELHISHNPSF    60
RELVEVEEEN IQIPPPRGKR SPRAAKRRPK RTTTLIDEFL DENSQLRHVF FPDMKTAIDP    120
MKDNGNDSFY YYPGRIWLDT EGAPIQAHGG GILYDERSRT YFWYGEYKDG PTYHAHKKAA    180
ARVDIIGVGC YSSKDMWTWK NEGIVLAAEE TNETHDLYKL NVLERPKVIY NDRTGKYVMW    240
MHIDDCNYTK AAVGVAISDY PTGPFDYLYS KRPHGFDSRD MTIFKDDDGV AYLVYSSEDN    300
SELHIGPLTS DYLDVSNVVR RILVGQHREA PALFKHLGTY YMVTSGCTGW APNEALVHAA    360
ESIMGPWEAM GNPCIGGNKV FRLTTFFAQS TYVIPLAGLP GLYIFMADRW NPADLRESRY    420
IWLPLIVRGP ADRPLEYNFG FPLWSRVSIY WHKKWRLPSR WSG* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_21.0e-14190373209+
cd08990GH43_AXH_like2.0e-18190371198+
cd09004GH43_bXyl2.0e-19189372196+
cd08978GH_F2.0e-46160425277+
cd08985GH43_64.0e-125145425282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU19498.1014621462unknown [Glycine max]
EMBLCBI33680.105646125430unnamed protein product [Vitis vinifera]
RefSeqNP_190557.101745916459glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.204245849466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.101046344497beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F013442545328A Chain A, Crystal Structure Of The Extracellular Phosphate Abc Transport Receptor (Psts-1) And Immunodominant Antigen Of M. Tuberculosis.
PDB3vt2_E013442545328A Chain A, Crystal Structure Of The Extracellular Phosphate Abc Transport Receptor (Psts-1) And Immunodominant Antigen Of M. Tuberculosis.
PDB3vt2_D013442545328A Chain A, Crystal Structure Of The Extracellular Phosphate Abc Transport Receptor (Psts-1) And Immunodominant Antigen Of M. Tuberculosis.
PDB3vt2_C013442545328A Chain A, Crystal Structure Of The Extracellular Phosphate Abc Transport Receptor (Psts-1) And Immunodominant Antigen Of M. Tuberculosis.
PDB3vt2_B013442545328A Chain A, Crystal Structure Of The Extracellular Phosphate Abc Transport Receptor (Psts-1) And Immunodominant Antigen Of M. Tuberculosis.
Transmembrane Domains
StartEnd
2042
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EY7037302951424360
GO3743623501204620
GO8561533341284610
FC9238992392034410
DY30672328712870
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny