| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10025771m |
| Family | GH17 |
| Protein Properties | Length: 402 Molecular Weight: 44279.8 Isoelectric Point: 8.9382 |
| Chromosome | Chromosome/Scaffold: 7 Start: 11369606 End: 11373020 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 46 | 364 | 0 |
| GINYGRIADNIPSPESVVTLLKAAKIKNIRIYDADQAVLKAFSGSGIEIIVGLGNENLKDISVGEDRAMNWIKANVDPYLPGTKIRGIAVGNEILGGTDL ELWEVLLPAAKNVYSALERLGLAKLIEVSSPHSEAVFANSFPPSACVFREDVSQFMKPLLQFFSQIGSPFYINAYPFLAYKNDPEHIDLNYATFKSNRGI HDAKTNLHYDNMFDAMVDAAYAALEKAGFPKMDVIVSETGWASRGDENEAGANVKNAKIYNKNLRKRLLKKKGTPYRPKKPVKAYIFALFNENLKPGPTS ERNFGLFKADGSIAYEIGF | |||
| Full Sequence |
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| Protein Sequence Length: 402 Download |
| MQSEEEQIKG RCCIVQKILL TSKQEEETQR HKIFRTRVNA FSGTYGINYG RIADNIPSPE 60 SVVTLLKAAK IKNIRIYDAD QAVLKAFSGS GIEIIVGLGN ENLKDISVGE DRAMNWIKAN 120 VDPYLPGTKI RGIAVGNEIL GGTDLELWEV LLPAAKNVYS ALERLGLAKL IEVSSPHSEA 180 VFANSFPPSA CVFREDVSQF MKPLLQFFSQ IGSPFYINAY PFLAYKNDPE HIDLNYATFK 240 SNRGIHDAKT NLHYDNMFDA MVDAAYAALE KAGFPKMDVI VSETGWASRG DENEAGANVK 300 NAKIYNKNLR KRLLKKKGTP YRPKKPVKAY IFALFNENLK PGPTSERNFG LFKADGSIAY 360 EIGFTGLVPS AASPSLHSFK SIGFGAGDWL ITCAAALLLM F* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 1.0e-5 | 42 | 355 | 326 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 8.0e-102 | 46 | 364 | 319 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN70046.1 | 0 | 38 | 396 | 22 | 373 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36326.1 | 0 | 38 | 399 | 33 | 395 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265779.1 | 0 | 38 | 367 | 23 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299750.1 | 0 | 38 | 380 | 10 | 352 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327527.1 | 0 | 38 | 380 | 1 | 342 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 46 | 364 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 46 | 364 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 46 | 364 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 46 | 365 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 46 | 365 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JK988667 | 286 | 38 | 323 | 0 |
| EL455956 | 297 | 40 | 336 | 0 |
| CO114700 | 264 | 38 | 301 | 0 |
| ES912714 | 266 | 40 | 305 | 0 |
| DT729331 | 238 | 38 | 274 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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