Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10025952m |
Family | GT8 |
Protein Properties | Length: 357 Molecular Weight: 40044.9 Isoelectric Point: 6.9075 |
Chromosome | Chromosome/Scaffold: 7 Start: 2441452 End: 2443391 |
Description | galacturonosyltransferase-like 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 67 | 329 | 0 |
AEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNYLANLL PPCVHKVVYLDSDLVLVDDISKLAATPLGDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKR MRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVR |
Full Sequence |
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Protein Sequence Length: 357 Download |
MSKTKPPHHQ QFLLLLLLLF LLIVTATNAA TKYKFKEAPQ FYNSQNCPNI IINQQGDEDH 60 LINTCSAEAI HVAMTLDAPY LRGSMAAIHS VLQHSSCPQN VLFHFVSSDK DANNLLHETI 120 SHSFPSLSFQ IYPFDDTAVS GLISTSIRSA LDCPLNYARN YLANLLPPCV HKVVYLDSDL 180 VLVDDISKLA ATPLGDHAVL AAPEYCNANF TSYFTPTFWS NPTLSLTFSG RNACYFNTGV 240 MVIDLERWRK GDYTRKIVEW MELQKRMRIY ELGSLPPFLL VFAGNIAPVD HRWNQHGLGG 300 DNYRGLCRDL HPGPVSLLHW SGKGKPWVRL DANRPCPLDA LWAPYDLLQT PFLLES* 360 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
cd04194 | GT8_A4GalT_like | 2.0e-13 | 70 | 327 | 267 | + A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS. |
PLN02659 | PLN02659 | 6.0e-14 | 210 | 345 | 138 | + Probable galacturonosyltransferase |
cd06429 | GT8_like_1 | 1.0e-17 | 236 | 330 | 97 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. |
pfam01501 | Glyco_transf_8 | 2.0e-45 | 71 | 331 | 263 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94510.1 | 0 | 34 | 356 | 36 | 362 | unknown [Populus trichocarpa] |
GenBank | ACW83060.1 | 0 | 27 | 356 | 25 | 362 | glycosyltransferase family GT8 protein [Populus deltoides] |
RefSeq | XP_002269182.1 | 0 | 14 | 356 | 7 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310780.1 | 0 | 25 | 356 | 32 | 352 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002326899.1 | 0 | 34 | 356 | 34 | 360 | glycosyltransferase family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00000002 | 157 | 329 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00000003 | 157 | 329 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00000003 | 157 | 329 | 84 | 254 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3tzt_B | 0.003 | 65 | 338 | 1 | 263 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
PDB | 3tzt_A | 0.003 | 65 | 338 | 1 | 263 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |