| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10026929m |
| Family | GH35 |
| Protein Properties | Length: 833 Molecular Weight: 94096 Isoelectric Point: 9.6561 |
| Chromosome | Chromosome/Scaffold: 7 Start: 713306 End: 717895 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 38 | 342 | 0 |
| LIINGKRELFFSGSIHYPRMPPEMWWDILKKAKAGGLNVIQTYVFWNIHEPEKGQFNFEGNYNLTKFIKMIGDLGMYATLRVGPFIEAEWNYGGFPFWLR EVPNITFRSDNPPFKYHMKKFTKMIIDMMKDAQLYASQGGPIILSQVENEYNTIQLAFRELGTRYVHWAGTMAVRLNTGVPWVMCKQKDAPGPVINTCNG RNCGDTFTGPNKPSKPVLWTENWTARYRVFGDPPSRRSAQNLAFSVARFFSKNGTLANYYMYYGGTNYGRSGSSFVTTRYYDEAPIDEYGMLREPKWGHL RDLHS | |||
| Full Sequence |
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| Protein Sequence Length: 833 Download |
| MSVPSRVLLA ALVCLLTIST VVQGEKFKRS VTYDGRSLII NGKRELFFSG SIHYPRMPPE 60 MWWDILKKAK AGGLNVIQTY VFWNIHEPEK GQFNFEGNYN LTKFIKMIGD LGMYATLRVG 120 PFIEAEWNYG GFPFWLREVP NITFRSDNPP FKYHMKKFTK MIIDMMKDAQ LYASQGGPII 180 LSQVENEYNT IQLAFRELGT RYVHWAGTMA VRLNTGVPWV MCKQKDAPGP VINTCNGRNC 240 GDTFTGPNKP SKPVLWTENW TARYRVFGDP PSRRSAQNLA FSVARFFSKN GTLANYYMYY 300 GGTNYGRSGS SFVTTRYYDE APIDEYGMLR EPKWGHLRDL HSALRLCKKA LLSGKPSVEN 360 FGPNLEAHIY EQPKTKACVA FLSNNDSRTP ATLTFRGSKY YLPQYSISIL PDCKTVVYNT 420 RMIVAQHSSR HYQKSKAANK ALRWEMFIED IPTLNENLIK SASPLEQWSV TKDTTDYLWH 480 TTGISLDGFH LPLRENVLPV LRIASLGHMM HGFVNGHYIG SGHGTNIENS FVFQKPIILK 540 PGINHISLLG VTIGLPDSGV YLERRYAGTR TVAIQGLNTG TLDVTYSEWG QKVGLDGEKF 600 QVYTQEGSDR VKWNKTKGLG GPLTWYKTYF DAPEGNDPLA IEVATMSKGM VWVNGKSIGR 660 YWVSFLSPTG KPSQSVYHIP RAFLKPKDNL LAIFEEIGGN IDGVQIVTVN RNTICSYIKE 720 SDPTRVNNRK REDIVIQKVF DDARRSATLM CPDNRKILRV EFASYGNPFG ACGNYILGNC 780 SAPSSKRIIE QYCLGKNRCA IPFDQNIFDR EKKLCLNVPK NLAIQVQCGE NK* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 6.0e-6 | 54 | 202 | 174 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 6.0e-14 | 751 | 828 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-21 | 31 | 188 | 166 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-138 | 37 | 344 | 321 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 30 | 828 | 824 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 31 | 829 | 49 | 843 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 29 | 830 | 26 | 828 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 1 | 829 | 1 | 830 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 21 | 828 | 22 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 31 | 828 | 31 | 825 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8.99998e-41 | 37 | 340 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0007 | 624 | 698 | 509 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-40 | 31 | 340 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-40 | 31 | 340 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
