Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10027025m |
Family | GT14 |
Protein Properties | Length: 431 Molecular Weight: 48487.8 Isoelectric Point: 8.8538 |
Chromosome | Chromosome/Scaffold: 7 Start: 16191641 End: 16194242 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 68 | 313 | 0 |
LAYWICGTNGDSKKMLRLLKAIYHPRNQYLLQLDADAPESERAELALKVQSETVFKAFGNVDVVGASYAIDKMGVSALAATLHAAALLLKISTNWDWFIP LSPSDYPLMSQDDVLHAFTFLPRDLNFIDFATNTGWKERLMINRIVIDPNLYYKKATPILYAVETRTNPDAFKIFGGSQWMILSRSFMVYCVQGWDNFPR KLLMYLTNVPYPLESYFHTIICNSPQFQNSTINTDLSFMKWESPAH |
Full Sequence |
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Protein Sequence Length: 431 Download |
MKMSKISYKV SGHQLWILAF ISSIILLATL SRSNVQVDQF SASGIKLKSH NQVPRRNVSK 60 GVDYPPILAY WICGTNGDSK KMLRLLKAIY HPRNQYLLQL DADAPESERA ELALKVQSET 120 VFKAFGNVDV VGASYAIDKM GVSALAATLH AAALLLKIST NWDWFIPLSP SDYPLMSQDD 180 VLHAFTFLPR DLNFIDFATN TGWKERLMIN RIVIDPNLYY KKATPILYAV ETRTNPDAFK 240 IFGGSQWMIL SRSFMVYCVQ GWDNFPRKLL MYLTNVPYPL ESYFHTIICN SPQFQNSTIN 300 TDLSFMKWES PAHVGPRTLT LPDYVEMVTS NKTTIFARPF EEDDPVLEKI DDRVLNRSGN 360 GVVPGNWCSI RGKKKNVESL KNGEELCSAS GNNIDAVKPG VYGMKLRALL SELVSDGRGK 420 INQCQEQVYN * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-56 | 68 | 328 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-108 | 66 | 425 | 360 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33324.1 | 0 | 59 | 424 | 56 | 413 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ABR16364.1 | 0 | 58 | 427 | 65 | 423 | unknown [Picea sitchensis] |
RefSeq | XP_002284096.1 | 0 | 58 | 425 | 45 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310932.1 | 0 | 59 | 424 | 35 | 392 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515811.1 | 0 | 23 | 424 | 2 | 401 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000002 | 84 | 309 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000002 | 84 | 309 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000002 | 84 | 309 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000002 | 84 | 309 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000006 | 84 | 309 | 101 | 320 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |