y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10027285m |
Family | AA1 |
Protein Properties | Length: 555 Molecular Weight: 61893.7 Isoelectric Point: 9.4644 |
Chromosome | Chromosome/Scaffold: 7 Start: 2835289 End: 2837921 |
Description | SKU5 similar 15 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 40 | 513 | 0 |
PYRSYTWTVTYGTISPFGVPQQGILINGQFPGPAIEAVTNDNIIVNLINKLDEPFLITWNGVKQRRTTWQDGVLGTNCPIPPNSNWTYKFQMKDQIGTFN YFPSTKVHRAFGGFGAVNVAQRSVISVPYHIPDGEFTLLVSDWFKNFSSHKALQKRLEDGYPLPVPDALLINGHHNSLSFTGQKGKTYKFRVSNVGIATS INFRIQGHTLTLVEVEGAHCLQESYESIDIHVGQSIAVIVAMHGPPKDYYIVASTRFTKPILTTTAILHYDGSNTPPSLPLPIAPTYHIHWSMKQARTIR TNLTANAARPNPQGSFHYGTIKVVRTIVLANSATKINNKLRYAVNGISYVNPITPLKLADWFNIPGVFDLNTIKDTPTPGAPAKLGASVIPTTLHDYVEI VFQNNEASVQSWHLDGSSFYVVGYGSGTWTADIRKRYNLNDAITRHTVQVYPQSWSAIYISLDNKGMWNLRSAI |
Full Sequence |
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Protein Sequence Length: 555 Download |
PTLRVFGGKI CDKMKGAIFL EILIGILACL CVFWVNAEDP YRSYTWTVTY GTISPFGVPQ 60 QGILINGQFP GPAIEAVTND NIIVNLINKL DEPFLITWNG VKQRRTTWQD GVLGTNCPIP 120 PNSNWTYKFQ MKDQIGTFNY FPSTKVHRAF GGFGAVNVAQ RSVISVPYHI PDGEFTLLVS 180 DWFKNFSSHK ALQKRLEDGY PLPVPDALLI NGHHNSLSFT GQKGKTYKFR VSNVGIATSI 240 NFRIQGHTLT LVEVEGAHCL QESYESIDIH VGQSIAVIVA MHGPPKDYYI VASTRFTKPI 300 LTTTAILHYD GSNTPPSLPL PIAPTYHIHW SMKQARTIRT NLTANAARPN PQGSFHYGTI 360 KVVRTIVLAN SATKINNKLR YAVNGISYVN PITPLKLADW FNIPGVFDLN TIKDTPTPGA 420 PAKLGASVIP TTLHDYVEIV FQNNEASVQS WHLDGSSFYV VGYGSGTWTA DIRKRYNLND 480 AITRHTVQVY PQSWSAIYIS LDNKGMWNLR SAIWERRYLG QELYLRVSND ERSLFTETDV 540 PPNALFCGKA KRPQ* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 2.0e-180 | 40 | 549 | 522 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 14 | 550 | 538 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 25 | 551 | 540 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 34 | 550 | 517 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 26 | 550 | 528 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 6 | 553 | 57 | 601 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195433.1 | 0 | 13 | 553 | 2 | 540 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002268020.1 | 0 | 6 | 553 | 123 | 667 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310164.1 | 0 | 14 | 553 | 1 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 14 | 553 | 1 | 540 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 42 | 552 | 4 | 543 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asq_A | 0 | 42 | 552 | 4 | 543 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_B | 0 | 42 | 552 | 4 | 543 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_A | 0 | 42 | 552 | 4 | 543 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1aso_B | 0 | 42 | 552 | 4 | 543 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |