Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10027321m |
Family | CE8 |
Protein Properties | Length: 367 Molecular Weight: 40936.8 Isoelectric Point: 9.1747 |
Chromosome | Chromosome/Scaffold: 7 Start: 1404813 End: 1406356 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 72 | 357 | 0 |
RLGNFVTVQKAINSLPVINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGRSGRPLGTYASATFAVNSPYFIAKNITFKNKAP LPPSGALGKQAVAFRISADTAAFTGCKFIGSQDTLYDHIGRHYFKNCYIEGSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLLEETGFSFVKCKV TGSGALYLGRAWGTFSRVVFAYTYMDKIITPRGWYDWGDKNREMTVFYGQYKCSGPGAYYGGRVSWSRELTQEEAEPFISVEFIDG |
Full Sequence |
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Protein Sequence Length: 367 Download |
MLLKLFLLAL LLERTSSWVA SNESNDLAVV EQGYLNWVNF KQHAPHLNHS LFQKAKNKFK 60 PCKTIKVNKN PRLGNFVTVQ KAINSLPVIN LCRVVIFISA GTYREKVEIP TTMAYITMIG 120 AGADNTVIEW DDTADRMGRS GRPLGTYASA TFAVNSPYFI AKNITFKNKA PLPPSGALGK 180 QAVAFRISAD TAAFTGCKFI GSQDTLYDHI GRHYFKNCYI EGSVDFIFGN GLSFYEDCHL 240 HAITNSYGAL TAQKRGSLLE ETGFSFVKCK VTGSGALYLG RAWGTFSRVV FAYTYMDKII 300 TPRGWYDWGD KNREMTVFYG QYKCSGPGAY YGGRVSWSRE LTQEEAEPFI SVEFIDGHQW 360 LPSHSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 4.0e-110 | 34 | 361 | 332 | + pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-112 | 74 | 361 | 288 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-113 | 63 | 361 | 301 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 1.0e-117 | 74 | 361 | 289 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 24 | 362 | 339 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17409.1 | 0 | 1 | 361 | 4 | 361 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266952.1 | 0 | 1 | 361 | 2 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310842.1 | 0 | 34 | 361 | 13 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330522.1 | 0 | 31 | 361 | 52 | 379 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531506.1 | 0 | 16 | 361 | 18 | 364 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 74 | 366 | 17 | 313 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8.00001e-42 | 74 | 363 | 13 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-28 | 67 | 349 | 35 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-16 | 76 | 363 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-16 | 76 | 363 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |