Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10027573m |
Family | GH17 |
Protein Properties | Length: 1113 Molecular Weight: 125527 Isoelectric Point: 7.3363 |
Chromosome | Chromosome/Scaffold: 7 Start: 18341498 End: 18350582 |
Description | tRNAHis guanylyltransferase |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 206 | 524 | 0 |
VGVNWGNLASHPLPAKIIVQMLKDNGIKRAKLFDADETSVKELAHTGIEVMVAIPNGMLFDMAVDYSNAQNWVKENVTRWVKDGSVKLKYVAVGNEPFLK SYNDSFVKDTFPALKNVQQALVEAGHGKMVKATVPLNADVYEGTLPSDGIFRKDIKQHINNILKNLHDNESPFIVNIYPFLSLYESPDFPVEYAFFEEGA KGLQDKNHRYTNVLDGNYDTLLWALKKAGYPDIKIIIGEIGWPTDGHKAATSQSAQKFYDGLFKKLAKRDGTPLRPGTEFDVYLFGFLDEDAKSIAPGKF ERHWGIFRFDGQPKFPIDF |
Full Sequence |
---|
Protein Sequence Length: 1113 Download |
MARAAFFFFL FLFISNHLIC QVLAQDDKNK DDGDNKDGNG NNNNGNGNDN NGNKNGNNGN 60 NNGNNNNGNS NGNNGNNNSN GGNNGNNNNG NNNGDNGNGN NNNNNNGNNG NNNGNNGNNN 120 GNNNGGNSSG NNNDNNNNGN NNNNGDNSNN GNSNNNKNND GNSNNGNNNN NGGNNNNNNN 180 GNNNNGGNHN AKVDNFDYAH IKPVDVGVNW GNLASHPLPA KIIVQMLKDN GIKRAKLFDA 240 DETSVKELAH TGIEVMVAIP NGMLFDMAVD YSNAQNWVKE NVTRWVKDGS VKLKYVAVGN 300 EPFLKSYNDS FVKDTFPALK NVQQALVEAG HGKMVKATVP LNADVYEGTL PSDGIFRKDI 360 KQHINNILKN LHDNESPFIV NIYPFLSLYE SPDFPVEYAF FEEGAKGLQD KNHRYTNVLD 420 GNYDTLLWAL KKAGYPDIKI IIGEIGWPTD GHKAATSQSA QKFYDGLFKK LAKRDGTPLR 480 PGTEFDVYLF GFLDEDAKSI APGKFERHWG IFRFDGQPKF PIDFTGRGQN KMPVGAKGVK 540 YYDHKWCVLD KGQVNKACDF EGLALITDKN ASVGNCLFPI QIDSGMANSK YEYVKSFEVE 600 DEIFSPNLLV VRIHGRDFQR FSHDHGFEKP NDERALNLMN TCAVAVLEEY PDIVFSYGYS 660 DEYSFVFKRT SKFYQRRASK ILSLIVSFFT SVYVTKWKEF FPLKEFRYPP SFQSRVISCA 720 SIEVLQQYLA WRQNDCHVNN QYETCLWMLI KHGKSENEAQ EILKGTQKQE KNELLFQQFG 780 INYKKIPEMF RQGSCVFKTE MEDIVKYNEN GAPVKRLRRK ARIVHSENIA GKSFWNGHSC 840 LLKELGRFDE DVGKIKPDYV RSFVFENKLI PSTWIVIRID GCHFHRFSEV HEFDKPNDEQ 900 ALNLMNSCAV AVLEEFEDIT FAYGVSDEYS FVLKNASMFY QRQASEIVSV IVSFFTSMYV 960 VKWKEFFPQK KLNYPPSFDG RAVCYPSSDI IRDYLAWRQV DCHINNQYNT CFWMLVKSGK 1020 SKSEAQGCLK GTQAREKNEL LIQKFGIDYS KLPLMFRQGS SIFRARTEKS VASENKSSVK 1080 VWNKVLVSHC NIIEPSFWMA HPSILNEEPP IY* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04446 | Thg1 | 9.0e-54 | 590 | 717 | 128 | + tRNAHis guanylyltransferase. The Thg1 protein from Saccharomyces cerevisiae is responsible for adding a GMP residue to the 5' end of tRNA His. The catalytic domain Thg1 contains a RRM (ferredoxin) fold palm domain, just like the viral RNA-dependent RNA polymerases, reverse transcriptases, family A and B DNA polymerases, adenylyl cyclases, diguanylate cyclases (GGDEF domain) and the predicted polymerase of the CRISPR system. Thg1 possesses an active site with three acidic residues that chelate Mg++ cations. Thg1 catalyzes polymerization similar to the 5'-3' polymerases. | ||
pfam04446 | Thg1 | 1.0e-62 | 856 | 986 | 131 | + tRNAHis guanylyltransferase. The Thg1 protein from Saccharomyces cerevisiae is responsible for adding a GMP residue to the 5' end of tRNA His. The catalytic domain Thg1 contains a RRM (ferredoxin) fold palm domain, just like the viral RNA-dependent RNA polymerases, reverse transcriptases, family A and B DNA polymerases, adenylyl cyclases, diguanylate cyclases (GGDEF domain) and the predicted polymerase of the CRISPR system. Thg1 possesses an active site with three acidic residues that chelate Mg++ cations. Thg1 catalyzes polymerization similar to the 5'-3' polymerases. | ||
COG4021 | COG4021 | 2.0e-64 | 587 | 825 | 240 | + Uncharacterized conserved protein [Function unknown] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-66 | 206 | 524 | 321 | + Glycosyl hydrolases family 17. | ||
COG4021 | COG4021 | 7.0e-68 | 859 | 1102 | 247 | + Uncharacterized conserved protein [Function unknown] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62815.1 | 0 | 586 | 1063 | 1 | 478 | hypothetical protein [Vitis vinifera] |
EMBL | CAN62815.1 | 0 | 588 | 801 | 269 | 482 | hypothetical protein [Vitis vinifera] |
EMBL | CAN62815.1 | 0 | 856 | 1107 | 5 | 259 | hypothetical protein [Vitis vinifera] |
EMBL | CBI21529.1 | 0 | 206 | 1109 | 27 | 985 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275722.1 | 0 | 586 | 1109 | 1 | 525 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ote_B | 0 | 852 | 1108 | 1 | 268 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 3ote_B | 0 | 586 | 844 | 1 | 267 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 3ote_A | 0 | 852 | 1108 | 1 | 268 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 3ote_A | 0 | 586 | 844 | 1 | 267 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 3otd_B | 0 | 852 | 1108 | 1 | 268 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |